RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 KCTD7Q96MP8 289 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 GDF15Q99988 308 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 SORBS1Q9BX66 1292 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 CPEB1Q9BZB8 566 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 TRPV5Q9NQA5 729 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 YARS2Q9Y2Z4 477 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 APOL3O95236 402 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 RAB36O95755 333 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 ALPPP05187 535 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 CCNYL3P0C7X3 344 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 C1GALT1C1LP0DN25 315 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 ETV5P41161 510 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 IL12RB1P42701 662 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 ETV1P50549 477 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 TPGS2Q68CL5 300 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 TCTN3Q6NUS6 607 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 FAM181AQ8N9Y4 354 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 ATP6V1C2Q8NEY4 427 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 GPR32P1Q8NGA4 272 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 OR52I1Q8NGK6 324 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 TMEM19Q96HH6 336 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 MSLNLQ96KJ4 702 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 TEFMQ96QE5 360 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 EFCAB11Q9BUY7 163 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 ANKRA2Q9H9E1 313 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 COMMD3Q9UBI1 195 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
VPS9D1-202ENST00000561976 A0A0B4J293 547 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 FOXE1O00358 373 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 NPC1O15118 1278 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 POLR1CO15160 346 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 PRKYO43930 277 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 CYP2A6P11509 494 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 NPPBP16860 134 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 MYL12AP19105 171 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 HLA-FP30511 346 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 ZNF284Q2VY69 593 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 CRTC2Q53ET0 693 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 TRIQKQ629K1 86 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 PGBD2Q6P3X8 592 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 TMEM220Q6QAJ8 160 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 HSDL2Q6YN16 418 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 TIFAQ96CG3 184 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 RNF31Q96EP0 1072 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 PDXPQ96GD0 296 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 DHRS1Q96LJ7 313 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 MALT1Q9UDY8 824 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 HS3ST2Q9Y278 367 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 PCM1Q15154 2024 aa13.27□□□□□ -0.28
VPS9D1-202ENST00000561976 QSOX1O00391 747 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 PLA2G10O15496 165 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 ARHGEF9O43307 516 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 NME6O75414 186 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 PSKH1P11801 424 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 GABRR2P28476 465 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 RECQLP46063 649 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 CAV3P56539 151 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 E2F2Q14209 437 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 UAP1L1Q3KQV9 507 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 MPP7Q5T2T1 576 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 UNC5DQ6UXZ4 953 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 YIPF7Q8N8F6 280 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 LRR1Q96L50 414 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 TAAR2Q9P1P5 351 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
VPS9D1-202ENST00000561976 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 LRRTM2O43300 516 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 SEMA7AO75326 666 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 PDE9AO76083 593 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 LGI1O95970 557 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 NR2F6P10588 404 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 SLC2A2P11168 524 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 CPEP16870 476 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF30P17039 623 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 VIPR1P32241 457 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 HTR2BP41595 481 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 OCLNQ16625 522 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 TRAM1L1Q8N609 369 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 SYT14Q8NB59 555 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 ZNF740Q8NDX6 193 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 AP3S1Q92572 193 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 MTERF3Q96E29 417 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 TMEM169Q96HH4 297 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 CITED4Q96RK1 184 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 SPNS1Q9H2V7 528 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 NDRG2Q9UN36 371 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 DIMT1Q9UNQ2 313 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 KLHL18O94889 574 aa13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 APEX1P27695 318 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-202ENST00000561976 OPRD1P41143 372 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms