RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ITIH4Q14624 930 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 HERC3Q15034 1050 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 PHKG1Q16816 387 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 PRAMEF20Q5VT98 475 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 SLC22A10Q63ZE4 541 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ICE2Q659A1 982 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 BICRALQ6AI39 1079 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 OPN5Q6U736 354 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 CLEC2AQ6UVW9 174 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 QSOX2Q6ZRP7 698 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 DNM1P46Q6ZS02 220 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 VN1R4Q7Z5H5 301 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 MILR1Q7Z6M3 343 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ZNF567Q8N184 647 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 LRRC25Q8N386 305 aaPredicted RBP4.82□□□□□ -1.64
HERC1-213ENST00000561359 MLKLQ8NB16 471 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 CAMKVQ8NCB2 501 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 TFB1MQ8WVM0 346 aaKnown RBP4.82□□□□□ -1.64
HERC1-213ENST00000561359 RAPGEF5Q92565 580 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 UCN3Q969E3 161 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 PRAP1Q96NZ9 151 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 OLFM3Q96PB7 478 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ALS2CR12Q96Q35 445 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 KRT12Q99456 494 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 EBNA1BP2Q99848 306 aaKnown RBP4.82□□□□□ -1.64
HERC1-213ENST00000561359 SLC39A3Q9BRY0 314 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 SYT11Q9BT88 431 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ACBD3Q9H3P7 528 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 CNTD2Q9H8S5 307 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 EML4Q9HC35 981 aaKnown RBP4.82□□□□□ -1.64
HERC1-213ENST00000561359 HOMER3Q9NSC5 361 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 QPCTLQ9NXS2 382 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 SPATA7Q9P0W8 599 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 KLHL14Q9P2G3 628 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ZNF223Q9UK11 482 aaPredicted RBP4.82□□□□□ -1.64
HERC1-213ENST00000561359 SLC6A5Q9Y345 797 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 ZDHHC9Q9Y397 364 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 MALRD1Q5VYJ5 2156 aa4.82□□□□□ -1.64
HERC1-213ENST00000561359 DOCK7Q96N67 2140 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 A0A096LNT2 108 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 IGKV3D-11A0A0A0MRZ8 115 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 OR51F1A6NGY5 319 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 LRRC3CA6NJW4 275 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 AVILO75366 819 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ANXA9O76027 345 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 STK10O94804 968 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 RCBTB2O95199 551 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ACSL3O95573 720 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ZFXP17010 805 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 KDELR1P24390 212 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 MSNP26038 577 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 EEF1GP26641 437 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 AOAHP28039 575 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 CCKARP32238 428 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 SLCO1A2P46721 670 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 GZMKP49863 264 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 GPR143P51810 404 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 NUDT6P53370 316 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 RPS15AP62244 130 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 EEF1A1P68104 462 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 MVKQ03426 396 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 GAB1Q13480 694 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 NR1I3Q14994 352 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 TOMM20Q15388 145 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 TERF2Q15554 542 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 DEFB134Q4QY38 66 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 CT47A1Q5JQC4 288 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 THEMIS2Q5TEJ8 643 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 EEF1A1P5Q5VTE0 462 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 SLC9A4Q6AI14 798 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 RANBP10Q6VN20 620 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 HSDL2Q6YN16 418 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 BZW1Q7L1Q6 419 aaKnown RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 IRF2BP2Q7Z5L9 587 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 CPNE8Q86YQ8 564 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 HSCBQ8IWL3 235 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 CNEP1R1Q8N9A8 125 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 BANPQ8N9N5 519 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 OR10H5Q8NGA6 315 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 OR9A1PQ8NGU1 263 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 GABPB2Q8TAK5 448 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 ZPLD1Q8TCW7 415 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 LKAAEAR1Q8TD35 194 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 MZB1Q8WU39 189 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ZFAND2BQ8WV99 257 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 SLC13A3Q8WWT9 602 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ABTB1Q969K4 478 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 FBXW5Q969U6 566 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 WDYHV1Q96HA8 205 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 CDKN2AIPNLQ96HQ2 116 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 PDLIM2Q96JY6 352 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 TTC1Q99614 292 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 C19orf43Q9BQ61 176 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 KLHL4Q9C0H6 718 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 RHBGQ9H310 441 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 ZCCHC4Q9H5U6 513 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms