RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MED8Q96G25 268 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
TPM1-228ENST00000560975 SLC12A9Q9BXP2 914 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 SPNS1Q9H2V7 528 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 TBC1D17Q9HA65 648 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 C1GALT1Q9NS00 363 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 GSTK1Q9Y2Q3 226 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 A0A1B0GVC2 190 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 A6NIN4 97 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 SAP18O00422 153 aaKnown RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 ALDH1A1P00352 501 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 PAHP00439 452 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 KLKB1P03952 638 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 OPRD1P41143 372 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 EVX1P49640 407 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 ZNF782Q6ZMW2 699 aaPredicted RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 DEF8Q6ZN54 512 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 RFLNAQ6ZTI6 216 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 USP45Q70EL2 814 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 RBM45Q8IUH3 476 aaKnown RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 TMEM163Q8TC26 289 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 MARVELD3Q96A59 401 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 TMED9Q9BVK6 235 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 STOML2Q9UJZ1 356 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 EXO1Q9UQ84 846 aaKnown RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 SOX18P35713 384 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 CCT3P49368 545 aaKnown RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 ILKQ13418 452 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 OR52N2Q8NGI0 321 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 WDR20Q8TBZ3 569 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 LRR1Q96L50 414 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 ATF6BQ99941 703 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 FBXO9Q9UK97 447 aaPredicted RBP15.69■□□□□ 0.1
TPM1-228ENST00000560975 RWDD3Q9Y3V2 267 aa15.69■□□□□ 0.1
TPM1-228ENST00000560975 TRBV5-4A0A0C4DH59 114 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 PRRG1O14668 218 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 ADAP00813 363 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 RAF1P04049 648 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 NR2F6P10588 404 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 NNMTP40261 264 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 WNT4P56705 351 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 RPS26P62854 115 aaKnown RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 GPR176Q14439 515 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 AANATQ16613 207 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 TMEM201Q5SNT2 666 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 DCST1Q5T197 706 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 GDF6Q6KF10 455 aaPredicted RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 MEX3DQ86XN8 651 aaKnown RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 ZNF655Q8N720 491 aaPredicted RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 GPR26Q8NDV2 337 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 C7orf57Q8NEG2 295 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 TOR1AIP2Q8NFQ8 470 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 FOXJ1Q92949 421 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 SOSTQ9BQB4 213 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 ZFP64Q9NPA5 681 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 SPATA6Q9NWH7 488 aaPredicted RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 NPIPB8E9PQR5 432 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 LANCL1O43813 399 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 MTX2O75431 263 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 IFNA14P01570 189 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 ASMTP46597 345 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 RAB8AP61006 207 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 B4GALNT1Q00973 533 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 IER5LQ5T953 404 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 C12orf73Q69YU5 71 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 CXorf57Q6NSI4 855 aaKnown RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 PLEKHH3Q7Z736 793 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 OR11H7Q8NGC8 314 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 ASB11Q8WXH4 323 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 WRAP53Q9BUR4 548 aaKnown RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 SCML1Q9UN30 329 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 DIMT1Q9UNQ2 313 aaKnown RBP15.68■□□□□ 0.1
TPM1-228ENST00000560975 AP1M2Q9Y6Q5 423 aa15.68■□□□□ 0.1
TPM1-228ENST00000560975 A0A0U1RQF3 1178 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 C2orf92A0A1B0GVN3 265 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 SHISA3A0PJX4 238 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 OAZ2O95190 189 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 CORO1AP31146 461 aaKnown RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 SPAM1P38567 509 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 NSG1P42857 185 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 GALEQ14376 348 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 TRIM40Q6P9F5 258 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 SERPINA13PQ6UXR4 307 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 QSOX2Q6ZRP7 698 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 CEP76Q8TAP6 659 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 UFD1Q92890 307 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 AIFM2Q9BRQ8 373 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 TRAF4Q9BUZ4 470 aaPredicted RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 PIGUQ9H490 435 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 SF3B6Q9Y3B4 125 aaKnown RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 PLXNA3P51805 1871 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 RNASET2O00584 256 aaKnown RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 IRS1P35568 1242 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 ATP5C1P36542 298 aaKnown RBP15.67■□□□□ 0.1
TPM1-228ENST00000560975 THPOP40225 353 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 BDKRB1P46663 353 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 EEF1A2Q05639 463 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms