RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
LDLR-212ENST00000560467 ASF1BQ9NVP2 202 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 LYARQ9NX58 379 aaKnown RBP11.11□□□□□ -0.63
LDLR-212ENST00000560467 PHF11Q9UIL8 331 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 PCDHGB4Q9UN71 923 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 SLC22A7Q9Y694 548 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 ANKRD12Q6UB98 2062 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 CACNA1DQ01668 2161 aa11.11□□□□□ -0.63
LDLR-212ENST00000560467 LOC105369274A0A096LPK9 316 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 LOC102723532A0A0G2JNH3 316 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 PLPP1O14494 284 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 GYG2O15488 501 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 UBOX5O94941 541 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 CBX6O95503 412 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 KRT16P08779 473 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 HBQ1P09105 142 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ALDOCP09972 364 aaKnown RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 FAM58BPP0C7Q3 252 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 MSL3P1P0C860 447 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 COX4I1P13073 169 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 DRD2P14416 443 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 SDC1P18827 310 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 OTX2P32243 289 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 UFM1P61960 85 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 ADPRMQ3LIE5 342 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ANXA8L1Q5VT79 327 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ADNP2Q6IQ32 1131 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 PAOXQ6QHF9 649 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 MED25Q71SY5 747 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 MRGPREQ86SM8 312 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 SNX32Q86XE0 403 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 OR4N4Q8N0Y3 316 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ZCCHC7Q8N3Z6 543 aaKnown RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 ACOT4Q8N9L9 421 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 TMEM102Q8N9M5 508 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 KCT2Q8NC54 265 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 DNAJB8Q8NHS0 232 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 PPCDCQ96CD2 204 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 SPDL1Q96EA4 605 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 NPLQ9BXD5 320 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 MYNNQ9NPC7 610 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 BAIAP2L1Q9UHR4 511 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 LEF1Q9UJU2 399 aaPredicted RBP11.1□□□□□ -0.63
LDLR-212ENST00000560467 PCSK5Q92824 1860 aa11.1□□□□□ -0.63
LDLR-212ENST00000560467 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 CELSR2Q9HCU4 2923 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 CAPN14A8MX76 684 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 B2RBV5 119 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 MASP2O00187 686 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 AKAP10O43572 662 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 NRP2O60462 931 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ETHE1O95571 254 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 STATHP02808 62 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ALAS2P22557 587 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 KIR3DL1P43629 444 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ALDH9A1P49189 494 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 RRADP55042 308 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 TAS2R50P59544 299 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 BNIP1Q12981 228 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 FAM53BQ14153 422 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 PTGR1Q14914 329 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 HKDC1Q2TB90 917 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 DEFB110Q30KQ9 67 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 DEFB134Q4QY38 66 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 COQ5Q5HYK3 327 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 FRMPD2BQ6IN97 320 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 BLOC1S3Q6QNY0 202 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 C16orf89Q6UX73 402 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 VN1R4Q7Z5H5 301 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 GPR180Q86V85 440 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 RAB43Q86YS6 212 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 HPS6Q86YV9 775 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 SAMD14Q8IZD0 417 aaPredicted RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 C7orf57Q8NEG2 295 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ZCCHC10Q8TBK6 192 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ADAMTS18Q8TE60 1221 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 UTP15Q8TED0 518 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 C16orf78Q8WTQ4 265 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 C5orf34Q96MH7 638 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 MACROD1Q9BQ69 325 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 ZNF385DQ9H6B1 395 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 REEP4Q9H6H4 257 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 FAM60AQ9NP50 221 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 NDOR1Q9UHB4 597 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 SRPK3Q9UPE1 567 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 SLC5A6Q9Y289 635 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 MRPS33Q9Y291 106 aaKnown RBP11.09□□□□□ -0.63
LDLR-212ENST00000560467 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 POLEQ07864 2286 aa11.09□□□□□ -0.63
LDLR-212ENST00000560467 A0A1W2PP18 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms