RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CRYBG3Q68DQ2 2970 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 PCNX1Q96RV3 2341 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 HS6ST1O60243 411 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 FGF17O60258 216 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 OR6B1O95007 311 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 TAC1P20366 129 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 CNR1P21554 472 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 SERPINB3P29508 390 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 MAGEA12P43365 314 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 GPR85P60893 370 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 GGTA1PQ4G0N0 100 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 TBCELQ5QJ74 424 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 MDGA2Q7Z553 956 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 IFT20Q8IY31 132 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 FAM109AQ8N4B1 249 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 RIT1Q92963 219 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
TPM1-223ENST00000560445 MTFMTQ96DP5 389 aaKnown RBP13.05□□□□□ -0.32
TPM1-223ENST00000560445 NOL11Q9H8H0 719 aaKnown RBP13.05□□□□□ -0.32
TPM1-223ENST00000560445 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 XPR1Q9UBH6 696 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 SNX6Q9UNH7 406 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 CELSR2Q9HCU4 2923 aa13.05□□□□□ -0.32
TPM1-223ENST00000560445 A0A0A6YYD5 115 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 A0A1B0GTH9 108 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 HMX2A2RU54 273 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 GOLGA6L10A6NI86 522 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 PROM1O43490 865 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 CDH16O75309 829 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 SH3BGRLO75368 114 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ABHD2P08910 425 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 SNRPAP09012 282 aaKnown RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 SLC35E2P0CK97 266 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 PIK3R1P27986 724 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 PTGER1P34995 402 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 NRG3P56975 720 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ADORA2A-AS1P86434 159 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 PIGGQ5H8A4 983 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 RNFT1Q5M7Z0 435 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 CD163Q86VB7 1156 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 WDR20Q8TBZ3 569 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 RND1Q92730 232 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 SPACA9Q96E40 222 aaPredicted RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 DTNBP1Q96EV8 351 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 GPR78Q96P69 363 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 CNPPD1Q9BV87 410 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ZDHHC11Q9H8X9 412 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 PSME2Q9UL46 239 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 CFL2Q9Y281 166 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 NCOA6Q14686 2063 aaPredicted RBP13.04□□□□□ -0.32
TPM1-223ENST00000560445 ABCA12Q86UK0 2595 aa13.04□□□□□ -0.32
TPM1-223ENST00000560445 TMEM200CA6NKL6 621 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 TP53I11O14683 189 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 SIX3O95343 332 aaPredicted RBP13.03□□□□□ -0.32
TPM1-223ENST00000560445 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 HOXD4P09016 255 aaPredicted RBP13.03□□□□□ -0.32
TPM1-223ENST00000560445 TNFRSF8P28908 595 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 SSTR2P30874 369 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 BSGP35613 385 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 ID2Q02363 134 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 HYAL4Q2M3T9 481 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 SLC22A10Q63ZE4 541 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 MRM1Q6IN84 353 aaKnown RBP13.03□□□□□ -0.32
TPM1-223ENST00000560445 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
TPM1-223ENST00000560445 CHTF18Q8WVB6 975 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 PHF21BQ96EK2 531 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 DMRTA2Q96SC8 542 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 TTTY12Q9BZ98 90 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 BRF2Q9HAW0 419 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 QPCTLQ9NXS2 382 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 PCTPQ9UKL6 214 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 RNF11Q9Y3C5 154 aa13.03□□□□□ -0.32
TPM1-223ENST00000560445 FOXO6A8MYZ6 492 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 TRIM49D1C9J1S8 452 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.33
TPM1-223ENST00000560445 SUSD5O60279 629 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 HCN1O60741 890 aa13.02□□□□□ -0.33
TPM1-223ENST00000560445 ETHE1O95571 254 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms