RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 TNNI3P19429 210 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 MAPK1P28482 360 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 CLCN2P51788 898 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 GPR143P51810 404 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 BTKQ06187 659 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 KLRB1Q12918 225 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 SMU1Q2TAY7 513 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ATP6AP1LQ52LC2 224 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 NOXRED1Q6NXP6 359 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ARMC10Q8N2F6 343 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 APCDD1LQ8NCL9 501 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 OR2T11Q8NH01 316 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 OR8K3Q8NH51 312 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 C19orf60Q96EN9 201 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF764Q96H86 408 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF354BQ96LW1 612 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF446Q9NWS9 450 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 PTGFRNQ9P2B2 879 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 COPS7AQ9UBW8 275 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 ANAPC2Q9UJX6 822 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 CES1P1Q9UKY3 287 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 DLGAP4Q9Y2H0 992 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 POLR3HQ9Y535 204 aaPredicted RBP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 PTGDR2Q9Y5Y4 395 aa12.14□□□□□ -0.47
NEDD8-208ENST00000560427 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
NEDD8-208ENST00000560427 PGRMC2O15173 223 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 ATP1B1P05026 303 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 CELA2AP08217 269 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 CPMP14384 443 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 CSNK2A2P19784 350 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 DDCP20711 480 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 HK2P52789 917 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 PPP2R2AP63151 447 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 ID2Q02363 134 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 MAD2L1Q13257 205 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 RAPSNQ13702 412 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 MEP1AQ16819 746 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 OR1N1Q8NGS0 311 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.13□□□□□ -0.47
NEDD8-208ENST00000560427 SLC2A12Q8TD20 617 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 KLHL29Q96CT2 875 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 EBPLQ9BY08 206 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 MIEF1Q9NQG6 463 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 GIMAP4Q9NUV9 329 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF780BQ9Y6R6 833 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 SPTA1P02549 2419 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 ATRXP46100 2492 aa12.13□□□□□ -0.47
NEDD8-208ENST00000560427 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 DYTNA2CJ06 578 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 A8MUA0 341 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 VPS4BO75351 444 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ZFAND5O76080 213 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 SLITRK5O94991 958 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 PORP16435 677 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 PCSK2P16519 638 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 RPL3P39023 403 aaKnown RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ASMTP46597 345 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ALDH9A1P49189 494 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 XKP51811 444 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 OCRLQ01968 901 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 NFATC3Q12968 1075 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 CEBPEQ15744 281 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 RFTN2Q52LD8 501 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 HSP90B2PQ58FF3 399 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ACER2Q5QJU3 275 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 FAM71E1Q6IPT2 247 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 HSDL2Q6YN16 418 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 GALNT12Q8IXK2 581 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 LRRC25Q8N386 305 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 RIT1Q92963 219 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 NCLNQ969V3 563 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 PNPLA2Q96AD5 504 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 TUBGCP3Q96CW5 907 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ZNF395Q9H8N7 513 aaPredicted RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 MED4Q9NPJ6 270 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
NEDD8-208ENST00000560427 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
NEDD8-208ENST00000560427 PIEZO2Q9H5I5 2752 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms