RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 BUD31P41223 144 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 SSR4P51571 173 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 HK2P52789 917 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 RNF4P78317 190 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 LCP2Q13094 533 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 RASA2Q15283 850 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF750Q32MQ0 723 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 CCNYL2Q5T2Q4 361 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 C10orf62Q5T681 223 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 SCIMPQ6UWF3 145 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 GFRALQ6UXV0 394 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC22A9Q8IVM8 553 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 CYP4Z2PQ8N1L4 340 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 TMEM156Q8N614 296 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 CPSF7Q8N684 471 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 C1orf52Q8N6N3 182 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 HORMAD2Q8N7B1 307 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 TMEM178AQ8NBL3 297 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 MYRIPQ8NFW9 859 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 DNAJB8Q8NHS0 232 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 METTL6Q8TCB7 284 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 AENQ8WTP8 325 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 RBM18Q96H35 190 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 RASL10BQ96S79 203 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 TNFRSF12AQ9NP84 129 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 SEC14L3Q9UDX4 400 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC5A6Q9Y289 635 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 YARS2Q9Y2Z4 477 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 TIMM22Q9Y584 194 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 GTF3C1Q12789 2109 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 NBPF19A0A087WUL8 3843 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 A0A0G2JMM0 328 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 A0A1W2PPB8 328 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 A0A1W2PRS3 328 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 A1L4Q6 167 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SYNDIG1LA6NDD5 238 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 WIPF3A6NGB9 483 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 KIR3DP1A8MWS1 328 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 LRRTM2O43300 516 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 CDH16O75309 829 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SLU7O95391 586 aaKnown RBP10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 MLYCDO95822 493 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 COX7A2P14406 83 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 PTGER1P34995 402 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SOX3P41225 446 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 MAPK12P53778 367 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 NAGLUP54802 743 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 FOXA1P55317 472 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 GPR85P60893 370 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ERVK-8P63133 956 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 PLIN5Q00G26 463 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 HMGCS1Q01581 520 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC18A2Q05940 514 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF267Q14586 743 aaPredicted RBP10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 NDUFAF5Q5TEU4 345 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 C1QL3Q5VWW1 255 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 CRYBG3Q68DQ2 2970 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 OR52E8Q6IFG1 317 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 IL20RBQ6UXL0 311 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SIAH3Q8IW03 269 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 SULF2Q8IWU5 870 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 C9orf40Q8IXQ3 194 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ST13P4Q8IZP2 240 aaPredicted RBP10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 TM4SF18Q96CE8 201 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 FBXL20Q96IG2 436 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 CNPPD1Q9BV87 410 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ACPTQ9BZG2 426 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 PPCSQ9HAB8 311 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 WDR41Q9HAD4 459 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 BRF2Q9HAW0 419 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 DEPPQ9NTK1 212 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 AHSPQ9NZD4 102 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 COPS7AQ9UBW8 275 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ADAM29Q9UKF5 820 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 GRID1Q9ULK0 1009 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ERVK-19Q9WJR5 959 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF407Q9C0G0 2248 aa10.8□□□□□ -0.68
RABGGTA-216ENST00000560243 PINLYPA6NC86 204 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 NPIPA5E9PKD4 350 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 G3V3Y1 287 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CDK2AP1O14519 115 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 COPEO14579 308 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 OR10H2O60403 315 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 ESRRBO95718 433 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 KRT6AP02538 564 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CLPSP04118 112 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 KRT6BP04259 564 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 STSP08842 583 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 NUDT17P0C025 328 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC35E2P0CK97 266 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CPA3P15088 417 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 SERPINB3P29508 390 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 HMOX2P30519 316 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 CCT5P48643 541 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 KRT6CP48668 564 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 MEOX1P50221 254 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 PKNOX1P55347 436 aa10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 RAE1P78406 368 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-216ENST00000560243 ALDH6A1Q02252 535 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms