RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MMABQ96EY8 250 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 C11orf24Q96F05 449 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 SMIM10Q96HG1 83 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 FCRL1Q96LA6 429 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 MAGEB10Q96LZ2 347 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 ZNF285Q96NJ3 590 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 NPAS2Q99743 824 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SIKE1Q9BRV8 207 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CCDC28BQ9BUN5 200 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CCDC106Q9BWC9 280 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 COPS7BQ9H9Q2 264 aaPredicted RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 SLAMF7Q9NQ25 335 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SLC22A11Q9NSA0 550 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SLC39A1Q9NY26 324 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CCDC167Q9P0B6 97 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 CTSFQ9UBX1 484 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 REV1Q9UBZ9 1251 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 DUSP13Q9UII6 198 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 SATB2Q9UPW6 733 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 APOBEC2Q9Y235 224 aaKnown RBP4.92□□□□□ -1.62
SPG11-220ENST00000559933 TSC22D4Q9Y3Q8 395 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 B3GALT1Q9Y5Z6 326 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 FREM2Q5SZK8 3169 aa4.92□□□□□ -1.62
SPG11-220ENST00000559933 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PTPRBP23467 1997 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CNOT1A5YKK6 2376 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 LOC100653049A0A140TA62 436 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 FAM221AA4D161 298 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 FITM1A5D6W6 292 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CAPN14A8MX76 684 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ANKRD65E5RJM6 399 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 NPIPB8E9PQR5 432 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PSMD12O00232 456 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 FBP2O00757 339 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SLC30A4O14863 429 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SCAMP2O15127 329 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 GALR3O60755 368 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 CNOT3O75175 753 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 VPS4BO75351 444 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 NME6O75414 186 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 SCRG1O75711 98 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KRT34O76011 436 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 HTR3BO95264 441 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 FKBP9O95302 570 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 FAM58BPP0C7Q3 252 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 LAMP1P11279 417 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 IDO1P14902 403 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PPP2R1BP30154 601 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SERPINB1P30740 379 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CCKBRP32239 447 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CDKN2CP42773 168 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MTTPP55157 894 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 LIM2P55344 173 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PHC1P78364 1004 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 GABPB1Q06547 395 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 EGR3Q06889 387 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KLC1Q07866 573 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ZNF763Q0D2J5 394 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SQLEQ14534 574 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 NAA25Q14CX7 972 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 LTB4RQ15722 352 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PGS1Q32NB8 556 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 TUBB8Q3ZCM7 444 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 FAM174BQ3ZCQ3 159 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 VPS26BQ4G0F5 336 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PDCD4Q53EL6 469 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 TMEM35AQ53FP2 167 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 NDUFAF5Q5TEU4 345 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ARHGAP40Q5TG30 622 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 OR4F3Q6IEY1 312 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MRM1Q6IN84 353 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 FAM71E1Q6IPT2 247 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SLC2A7Q6PXP3 512 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ABHD13Q7L211 337 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SPATA19Q7Z5L4 167 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 GLRX5Q86SX6 157 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PPP1R3BQ86XI6 285 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KMT5CQ86Y97 462 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 TICAM1Q8IUC6 712 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CLECL1Q8IZS7 167 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 MIER2Q8N344 545 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CPSF7Q8N684 471 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 TTC29Q8NA56 475 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 BHLHE22Q8NFJ8 381 aaPredicted RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 PROKR1Q8TCW9 393 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 TSLPQ969D9 159 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 EXOSC8Q96B26 276 aaKnown RBP4.91□□□□□ -1.62
SPG11-220ENST00000559933 RCN3Q96D15 328 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 PEX11GQ96HA9 241 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 RHOVQ96L33 236 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 CCT7Q99832 543 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 SLC39A3Q9BRY0 314 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 INPP5KQ9BT40 448 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 ASPNQ9BXN1 380 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 DPY30Q9C005 99 aa4.91□□□□□ -1.62
SPG11-220ENST00000559933 BRINP2Q9C0B6 783 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms