RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 STON2Q8WXE9 905 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 CNRIP1Q96F85 164 aaPredicted RBP20.27■□□□□ 0.84
SNX1-206ENST00000559389 OR52B2Q96RD2 323 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 TRIM55Q9BYV6 548 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 FAM53CQ9NYF3 392 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 PSME2Q9UL46 239 aa20.27■□□□□ 0.84
SNX1-206ENST00000559389 TBX19O60806 448 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 ERAL1O75616 437 aaKnown RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 LRATO95237 230 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 SLC35E2P0CK97 266 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 CPMP14384 443 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 HPCAL1P37235 193 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 IDH3AP50213 366 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 EXT1Q16394 746 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 ZNF750Q32MQ0 723 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 PLAG1Q6DJT9 500 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 SPATA19Q7Z5L4 167 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 NFAM1Q8NET5 270 aaPredicted RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 GFM2Q969S9 779 aaKnown RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 EXOSC8Q96B26 276 aaKnown RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 ZNF681Q96N22 645 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 ZNF317Q96PQ6 595 aaPredicted RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 EBF4Q9BQW3 602 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 SIKE1Q9BRV8 207 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 REEP4Q9H6H4 257 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 NPHS2Q9NP85 383 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 ATP13A2Q9NQ11 1180 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 AIG1Q9NVV5 245 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 TAS2R7Q9NYW3 318 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 PPIEQ9UNP9 301 aaKnown RBP20.26■□□□□ 0.83
SNX1-206ENST00000559389 ENTPD4Q9Y227 616 aa20.26■□□□□ 0.83
SNX1-206ENST00000559389 A8MUA0 341 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 AKAP10O43572 662 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 OR10H2O60403 315 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 DNAJB5O75953 348 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 VIMP08670 466 aaKnown RBP20.25■□□□□ 0.83
SNX1-206ENST00000559389 COX7A2P14406 83 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 CSNK2A2P19784 350 aaPredicted RBP20.25■□□□□ 0.83
SNX1-206ENST00000559389 GALNSP34059 522 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 XKP51811 444 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 C21orf58P58505 322 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 DUSP2Q05923 314 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 CEBPEQ15744 281 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 PRSS53Q2L4Q9 553 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 BTBD16Q32M84 506 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 NXNQ6DKJ4 435 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 ACAD11Q709F0 780 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 SAMD14Q8IZD0 417 aaPredicted RBP20.25■□□□□ 0.83
SNX1-206ENST00000559389 OR14A16Q8NHC5 309 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 CEP70Q8NHQ1 597 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 PTPMT1Q8WUK0 201 aaPredicted RBP20.25■□□□□ 0.83
SNX1-206ENST00000559389 TTC9Q92623 222 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 EXTL1Q92935 676 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 MTERF3Q96E29 417 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 SLC35C2Q9NQQ7 365 aa20.25■□□□□ 0.83
SNX1-206ENST00000559389 SCAMP2O15127 329 aaKnown RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 POLR3GO15318 223 aaPredicted RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 ATP1B1P05026 303 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 SERPINA7P05543 415 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 CELA2AP08217 269 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 PORP16435 677 aaPredicted RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 RPL3P39023 403 aaKnown RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 CLDN8P56748 225 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 SOX8P57073 446 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 RHDQ02161 417 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 SPRED3Q2MJR0 410 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 LSM12Q3MHD2 195 aaKnown RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 ZNF385BQ569K4 471 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 CGB2Q6NT52 195 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 FAM180BQ6P0A1 224 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 DGAT2L6Q6ZPD8 337 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 FAM9CQ8IZT9 166 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 LRRC25Q8N386 305 aaPredicted RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 AMER2Q8N7J2 671 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 B3GNT7Q8NFL0 401 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 RFWD2Q8NHY2 731 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 DAZLQ92904 295 aaKnown RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 PPCDCQ96CD2 204 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 THOC1Q96FV9 657 aaKnown RBP20.24■□□□□ 0.83
SNX1-206ENST00000559389 CCDC28BQ9BUN5 200 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 GIMAP4Q9NUV9 329 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 ATP6V1HQ9UI12 483 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 ZNF780BQ9Y6R6 833 aa20.24■□□□□ 0.83
SNX1-206ENST00000559389 C17orf105B2RV13 164 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 ANKRD28O15084 1053 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 CEACAM4O75871 244 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 ICAM2P13598 275 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 PRPS1L1P21108 318 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 FEN1P39748 380 aaKnown RBP20.23■□□□□ 0.83
SNX1-206ENST00000559389 GYS2P54840 703 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 POLE2P56282 527 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 TMEM198Q66K66 360 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 ANKRD26P1Q6NSI1 321 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 PKD1L2Q7Z442 2459 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 R3HCC1LQ7Z5L2 792 aaKnown RBP20.23■□□□□ 0.83
SNX1-206ENST00000559389 RIMKLAQ8IXN7 391 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 KBTBD2Q8IY47 623 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 KRTCAP2Q8N6L1 136 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 M1APQ8TC57 530 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms