RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 YRDCQ86U90 279 aaKnown RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 OR4N5Q8IXE1 308 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ELMOD1Q8N336 334 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 TEX9Q8N6V9 391 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 LRRC17Q8N6Y2 441 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 RNF148Q8N7C7 305 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 BANPQ8N9N5 519 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ZNF540Q8NDQ6 660 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 DDHD1Q8NEL9 900 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 OR4D10Q8NGI6 311 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 OR52B4Q8NGK2 314 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 OR5M9Q8NGP3 310 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ZNF519Q8TB69 540 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 MAPK15Q8TD08 544 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 GANCQ8TET4 914 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 FCGR1BQ92637 280 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 PNPLA2Q96AD5 504 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 GMPPAQ96IJ6 420 aaPredicted RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 LRR1Q96L50 414 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ACCSQ96QU6 501 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 TNFRSF13CQ96RJ3 184 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 WDR13Q9H1Z4 485 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 DPH5Q9H2P9 285 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 LIME1Q9H400 295 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 RWDD1Q9H446 243 aaPredicted RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 COQ10BQ9H8M1 238 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 MARCH7Q9H992 704 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 UBE2TQ9NPD8 197 aaPredicted RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 HPS4Q9NQG7 708 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 GDF3Q9NR23 364 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 NLGN3Q9NZ94 848 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 CGNQ9P2M7 1197 aaKnown RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 ANKMY1Q9P2S6 941 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 MIOXQ9UGB7 285 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 LNPEPQ9UIQ6 1025 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 IKZF3Q9UKT9 509 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ZNF346Q9UL40 294 aaKnown RBP1.39□□□□□ -2.19
USP3-209ENST00000558925 TMCC3Q9ULS5 477 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ENTPD4Q9Y227 616 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 SLC6A5Q9Y345 797 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 ATP6V0A2Q9Y487 856 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 AP1M2Q9Y6Q5 423 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 UBE4BO95155 1302 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 UMODL1Q5DID0 1318 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 RNF123Q5XPI4 1314 aa1.39□□□□□ -2.19
USP3-209ENST00000558925 IGHV3-20A0A0C4DH32 117 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 LOC390937A0A1W2PQ73 354 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MEX3AA1L020 520 aaKnown RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 PRR23AA6NEV1 266 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 NKX6-3A6NJ46 265 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 YJEFN3A6XGL0 299 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 TCP10L2B9ZVM9 353 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 F8WDY8 70 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 FAM72CH0Y354 149 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 K7EQD1 137 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 KIAA0513O60268 411 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ZG16O60844 167 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 CSDE1O75534 798 aaKnown RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 NXPH4O95158 308 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 APBB3O95704 486 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 FGF19O95750 216 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MBD3O95983 291 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 IGHDP01880 384 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 CA3P07451 260 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 FHP07954 510 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 SP1P08047 785 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 SERPINF2P08697 491 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MYOGP15173 224 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ZNF26P17031 533 aaPredicted RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 CEBPBP17676 345 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ARF4P18085 180 aaPredicted RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 PAX7P23759 505 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 FCARP24071 287 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 TMOD1P28289 359 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 PPP2R1AP30153 589 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MAT2AP31153 395 aaKnown RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 DLSTP36957 453 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MDH1P40925 334 aaKnown RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 ACAA2P42765 397 aaKnown RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 ACADSBP45954 432 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ASMTP46597 345 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MTTPP55157 894 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 RAG2P55895 527 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 NAAAQ02083 359 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ELP6Q0PNE2 266 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 RIGQ13278 110 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 NFATC2Q13469 925 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 RAPSNQ13702 412 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 DPYSQ14117 519 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 GCKRQ14397 625 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 PDIA5Q14554 519 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 TRADDQ15628 312 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 MLF2Q15773 248 aaPredicted RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 HLA-BQ31612 363 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ADPRMQ3LIE5 342 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 ZFP69Q49AA0 526 aa1.38□□□□□ -2.19
USP3-209ENST00000558925 TTC31Q49AM3 519 aaPredicted RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 RFTN2Q52LD8 501 aaPredicted RBP1.38□□□□□ -2.19
USP3-209ENST00000558925 TEX35Q5T0J7 233 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms