RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 HIPK4Q8NE63 616 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 DNAJB14Q8TBM8 379 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 TMEM125Q96AQ2 219 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 CGREF1Q99674 301 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 PDE7BQ9NP56 450 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 CMTM6Q9NX76 183 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
TMED3-205ENST00000558562 CD300AQ9UGN4 299 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 MCM8Q9UJA3 840 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 RARRES3Q9UL19 164 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 SNX7Q9UNH6 387 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
TMED3-205ENST00000558562 SLC5A6Q9Y289 635 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 PCDHA9Q9Y5H5 950 aa12.74□□□□□ -0.37
TMED3-205ENST00000558562 OR6C74A6NCV1 312 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 HAT1O14929 419 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 NDUFS4O43181 175 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 STAMBPO95630 424 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 SERPIND1P05546 499 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 PRF1P14222 555 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 MSX2P35548 267 aaPredicted RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 BCL6P41182 706 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 EEFSECP57772 596 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 AP2B1P63010 937 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 PLIN5Q00G26 463 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 SRSF11Q05519 484 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 TRAP1Q12931 704 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 ZNF425Q6IV72 752 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 AAGABQ6PD74 315 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 DNAJC14Q6Y2X3 702 aaPredicted RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 PAGE2Q7Z2X7 111 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 CISD2Q8N5K1 135 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 DNAJB8Q8NHS0 232 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 GTF2H4Q92759 462 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 MR1Q95460 341 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 PNPLA2Q96AD5 504 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 SNRNP40Q96DI7 357 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 ZDHHC12Q96GR4 267 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 ITCHQ96J02 903 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 PPM1MQ96MI6 270 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 REXO4Q9GZR2 422 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 MYNNQ9NPC7 610 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 ASF1BQ9NVP2 202 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 ACTR10Q9NZ32 417 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 SLAMF8Q9P0V8 285 aa12.73□□□□□ -0.37
TMED3-205ENST00000558562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.73□□□□□ -0.37
TMED3-205ENST00000558562 A0A096LPI6 279 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 GSAPA4D1B5 854 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 PLPP1O14494 284 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 ERN1O75460 977 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 CEACAM4O75871 244 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 BCAS2O75934 225 aaPredicted RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 TBX6O95947 436 aaPredicted RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 KLK1P06870 262 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 HSD17B1P14061 328 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 UGT2B7P16662 529 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 POLR2CP19387 275 aaPredicted RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 AHRP35869 848 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 RPL3P39023 403 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 GSK3BP49841 420 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 PHC1P78364 1004 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 MS4A2Q01362 244 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 BNIP2Q12982 314 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 TRIM25Q14258 630 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 RABL3Q5HYI8 236 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 NANOGP8Q6NSW7 305 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 TRIM73Q86UV7 250 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 PAQR7Q86WK9 346 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 MFSD9Q8NBP5 474 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 BHLHE22Q8NFJ8 381 aaPredicted RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 QRFPRQ96P65 431 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 F2RL3Q96RI0 385 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 SARGQ9BW04 601 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 TRIM8Q9BZR9 551 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 NANOGQ9H9S0 305 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 S100A14Q9HCY8 104 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 GMPR2Q9P2T1 348 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 F8P00451 2351 aa12.72□□□□□ -0.37
TMED3-205ENST00000558562 DIDO1Q9BTC0 2240 aaKnown RBP12.72□□□□□ -0.37
TMED3-205ENST00000558562 CSMD2Q7Z408 3487 aa12.71□□□□□ -0.37
TMED3-205ENST00000558562 SETD2Q9BYW2 2564 aaPredicted RBP12.71□□□□□ -0.37
TMED3-205ENST00000558562 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.37
TMED3-205ENST00000558562 ANKUB1A6NFN9 424 aa12.71□□□□□ -0.37
TMED3-205ENST00000558562 C2orf74A8MZ97 194 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms