RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DNAJC13O75165 2243 aa14.69□□□□□ -0.06
SCFD1-224ENST00000557713 LRRC3CA6NJW4 275 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 FAM47E-STBD1D6RA91 191 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 K7EPI3 171 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 EIF3HO15372 352 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 KCNJ2P63252 427 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 TBL3Q12788 808 aaKnown RBP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 PRAMEF20Q5VT98 475 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 C18orf63Q68DL7 685 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 C3orf62Q6ZUJ4 267 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 SEM1Q6ZVN7 128 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 GPR180Q86V85 440 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 DND1Q8IYX4 353 aaKnown RBP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 FBXW8Q8N3Y1 598 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 UBTD2Q8WUN7 234 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 EXT2Q93063 718 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 RGMAQ96B86 450 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 ART5Q96L15 291 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 ATOH8Q96SQ7 321 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 FOXC2Q99958 501 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 ALG9Q9H6U8 611 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 EXO5Q9H790 373 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 QPCTLQ9NXS2 382 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 DNAJB12Q9NXW2 375 aaKnown RBP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 NUDT4Q9NZJ9 180 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 CNIH4Q9P003 139 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 OPTCQ9UBM4 332 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 ADGRE2Q9UHX3 823 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 BOKQ9UMX3 212 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 TSC22D4Q9Y3Q8 395 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 CHCHD2Q9Y6H1 151 aaPredicted RBP14.68□□□□□ -0.06
SCFD1-224ENST00000557713 SPG11Q96JI7 2443 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 MTORP42345 2549 aa14.68□□□□□ -0.06
SCFD1-224ENST00000557713 FAM221AA4D161 298 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 WASHC1A8K0Z3 465 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 SYT5O00445 386 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PLPP1O14494 284 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PROM1O43490 865 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 DYRK3O43781 588 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 FBXO45P0C2W1 286 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 SLC35E2BP0CK96 405 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ALOX15P16050 662 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 SPRP35270 261 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PIK3CBP42338 1070 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ARFIP1P53367 373 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 HNRNPH2P55795 449 aaKnown RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 GPX6P59796 221 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 GNG11P61952 73 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 MRPS25P82663 173 aaKnown RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PLIN5Q00G26 463 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 TNFRSF17Q02223 184 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 GRTP1Q5TC63 336 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 GRHL2Q6ISB3 625 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ULK2Q8IYT8 1036 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ST13P4Q8IZP2 240 aaPredicted RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ZCCHC7Q8N3Z6 543 aaKnown RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 HUS1BQ8NHY5 278 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 NEIL3Q8TAT5 605 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 DOK4Q8TEW6 326 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 NINJ1Q92982 152 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ERP44Q9BS26 406 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 NMRAL1Q9HBL8 299 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 IGSF5Q9NSI5 407 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 RYDENQ9NUL5 291 aaKnown RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF358Q9NW07 568 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 WHRNQ9P202 907 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 B4GALT7Q9UBV7 327 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 PHF11Q9UIL8 331 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 CNOT11Q9UKZ1 510 aaKnown RBP14.67□□□□□ -0.06
SCFD1-224ENST00000557713 ITPR3Q14573 2671 aa14.67□□□□□ -0.06
SCFD1-224ENST00000557713 UBXN8O00124 270 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 KERAO60938 352 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 PRKRAO75569 313 aaKnown RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 FAM155BO75949 473 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 GPR75O95800 540 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 CLPSP04118 112 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 GSTA2P09210 222 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 MTHFD2P13995 350 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 CD99P14209 185 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 EPB42P16452 691 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 SERPINB3P29508 390 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 TLX1P31314 330 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 SLC37A1P57057 533 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 HERVK_113P63132 956 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ERVK-8P63133 956 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 SNTB1Q13884 538 aaKnown RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF267Q14586 743 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 SPRED3Q2MJR0 410 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 MRM1Q6IN84 353 aaKnown RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 WDR53Q7Z5U6 358 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 CMC1Q7Z7K0 106 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ZZZ3Q8IYH5 903 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 FAM13CQ8NE31 585 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 OR10G3Q8NGC4 313 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 NAPGQ99747 312 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ERVK-6Q9BXR3 956 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF717Q9BY31 904 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 POLDIP3Q9BY77 421 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms