RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 DEF8Q6ZN54 512 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 IKBIPQ70UQ0 350 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 WDR53Q7Z5U6 358 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 FAM26EQ8N5C1 309 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 OR52I1Q8NGK6 324 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZFAND1Q8TCF1 268 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM203Q969S6 136 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 WDR34Q96EX3 536 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 DHRS1Q96LJ7 313 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 FAM83CQ9BQN1 747 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 A4GALTQ9NPC4 353 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CXorf51AA0A1B0GTR3 108 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TLX2O43763 284 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 HCN1O60741 890 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 MYL12AP19105 171 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TNNI3P19429 210 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 VIPR1P32241 457 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 MAP2K3P46734 347 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 EPHB3P54753 998 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 DCDC1P59894 354 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CYP4F8P98187 520 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 FAPQ12884 760 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 GPR19Q15760 415 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 Q6ZVL8 140 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PLCZ1Q86YW0 608 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 UBE2J2Q8N2K1 259 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CADM2Q8N3J6 435 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TRAM1L1Q8N609 369 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 LILRA3Q8N6C8 439 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 C19orf18Q8NEA5 215 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC38A5Q8WUX1 472 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM19Q96HH6 336 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 POLDIP3Q9BY77 421 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC6A16Q9GZN6 736 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 RERGLQ9H628 205 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CXorf36Q9H7Y0 433 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SEMA3GQ9NS98 782 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CFAP97Q9P2B7 532 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC25A13Q9UJS0 675 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 STK25O00506 426 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC30A4O14863 429 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CPNE3O75131 537 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 KLHL18O94889 574 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CCNYL3P0C7X3 344 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 NR2F6P10588 404 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 NPPBP16860 134 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ETV5P41161 510 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ETV1P50549 477 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CTSCP53634 463 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 WNT4P56705 351 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PPP3R1P63098 170 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ALDH6A1Q02252 535 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 C19orf57Q0VDD7 668 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 EFR3AQ14156 821 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PLK5Q496M5 336 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 KLHL22Q53GT1 634 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF628Q5EBL2 1059 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 MZT2BQ6NZ67 158 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TNFAIP8L2Q6P589 184 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 GDPD4Q6W3E5 623 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 YIPF7Q8N8F6 280 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CHST14Q8NCH0 376 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ATP6V1C2Q8NEY4 427 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 C1GALT1C1Q96EU7 318 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM169Q96HH4 297 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ZSCAN5AQ9BUG6 496 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 RIOK2Q9BVS4 552 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 NIPAL2Q9H841 368 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 GIMAP4Q9NUV9 329 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ICKQ9UPZ9 632 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PLXNA2O75051 1894 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 OBSL1O75147 1896 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PROM1O43490 865 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PRKYO43930 277 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SH3BP5O60239 455 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 EFEMP2O95967 443 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CKMP06732 381 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ALAS2P22557 587 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SSTR4P31391 388 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ETV3P41162 512 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 HTR2BP41595 481 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 GZMKP49863 264 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms