RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ATCAYQ86WG3 371 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 OR4N5Q8IXE1 308 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ST13P4Q8IZP2 240 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 BEST3Q8N1M1 668 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 KIF2BQ8N4N8 673 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 C1orf52Q8N6N3 182 aaKnown RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 HORMAD2Q8N7B1 307 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 AMER2Q8N7J2 671 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 PTPMT1Q8WUK0 201 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 NCLNQ969V3 563 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ART5Q96L15 291 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 UTP23Q9BRU9 249 aaKnown RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 FAIM2Q9BWQ8 316 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 COPS7AQ9UBW8 275 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 CSAG2Q9Y5P2 127 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 GOLGA6L10A6NI86 522 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 GABRR3A8MPY1 467 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 AZIN1O14977 448 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 TM9SF1O15321 606 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 OR10H2O60403 315 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 PRKRAO75569 313 aaKnown RBP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 WISP1O95388 367 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 CHEK2O96017 543 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 BPGMP07738 259 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 CHN1P15882 459 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 MLF1P58340 268 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 INAQ16352 499 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 SPDYAQ5MJ70 313 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 HSDL2Q6YN16 418 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 TRIM46Q7Z4K8 759 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 OR4K14Q8NGD5 310 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 OR1N1Q8NGS0 311 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 OR8K3Q8NH51 312 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 SLC2A12Q8TD20 617 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 MIB2Q96AX9 1013 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 TM4SF18Q96CE8 201 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 METTL2AQ96IZ6 378 aaKnown RBP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 NPAS2Q99743 824 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 MECRQ9BV79 373 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 OR8D2Q9GZM6 311 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 RRAGDQ9NQL2 400 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 SIRT5Q9NXA8 310 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 PSME2Q9UL46 239 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 PCDHA9Q9Y5H5 950 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 COPG1Q9Y678 874 aaKnown RBP11.64□□□□□ -0.55
SLIRP-211ENST00000557623 KALRNO60229 2985 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 SPTA1P02549 2419 aa11.64□□□□□ -0.55
SLIRP-211ENST00000557623 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SHANK1Q9Y566 2161 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 GNG14A0A1W2PPG7 69 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 GLOD5A6NK44 160 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SLC28A1O00337 649 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 RGS14O43566 566 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 PCDH7O60245 1069 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 PRAMEF2O60811 474 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 VPS4BO75351 444 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 ZWINTO95229 277 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 F10P00742 488 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 FGF4P08620 206 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SLC35E2P0CK97 266 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SERPINB3P29508 390 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 TIA1P31483 386 aaKnown RBP eCLIP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 ETV4P43268 484 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 HMGCS1Q01581 520 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 OC90Q02509 493 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 BTKQ06187 659 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 TUBA3CQ13748 450 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SPRED3Q2MJR0 410 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 C6orf163Q5TEZ5 329 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 TUBA3EQ6PEY2 450 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SCIMPQ6UWF3 145 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 RNF165Q6ZSG1 346 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 NUDCD3Q8IVD9 361 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 CISD2Q8N5K1 135 aaKnown RBP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 OR5L2Q8NGL0 311 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 RIT1Q92963 219 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SNRNP40Q96DI7 357 aaKnown RBP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 APIPQ96GX9 242 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 SHCBP1LQ9BZQ2 653 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 AGPAT4Q9NRZ5 378 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 ZNF223Q9UK11 482 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-211ENST00000557623 VPS4AQ9UN37 437 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
SLIRP-211ENST00000557623 PGRMC2O15173 223 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 BIRC5O15392 142 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 MAN1A2O60476 641 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 DDAH2O95865 285 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 NEFHP12036 1026 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 DRD2P14416 443 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 PRPH2P23942 346 aa11.62□□□□□ -0.55
SLIRP-211ENST00000557623 TRHRP34981 398 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-211ENST00000557623 CD96P40200 585 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms