RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CHERPQ8IWX8 916 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CTAGE3PQ8IX95 158 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 DEFB107AQ8IZN7 70 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PGAM4Q8N0Y7 254 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TEX26Q8N6G2 289 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 METTL25Q8N6Q8 603 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PACRGLQ8N7B6 248 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM71DQ8N9W8 422 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 RP9Q8TA86 221 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PPP1R14CQ8TAE6 165 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF420Q8TAQ5 688 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM57AQ8TBR7 257 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TFB1MQ8WVM0 346 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CDKL2Q92772 493 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 C8orf44Q96CB5 159 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 FAF2Q96CS3 445 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 EID2BQ96D98 161 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 SIGLEC10Q96LC7 697 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF597Q96LX8 424 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF778Q96MU6 729 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 BDH2Q9BUT1 245 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 OSBPL11Q9BXB4 747 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ADGRE3Q9BY15 652 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 NUF2Q9BZD4 464 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TP63Q9H3D4 680 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 C12orf65Q9H3J6 166 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 EIF2B3Q9NR50 452 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 RIC8BQ9NVN3 520 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 BEX4Q9NWD9 120 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 UTP6Q9NYH9 597 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 UBAP1Q9NZ09 502 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CTSFQ9UBX1 484 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TRPS1Q9UHF7 1281 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ASB1Q9Y576 335 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 SCN2AQ99250 2005 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 MPDZO75970 2070 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TRIM64A6NGJ6 449 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TRIM64BA6NI03 449 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 VSTM2BA6NLU5 285 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 OR2AG2A6NM03 316 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 DSCR3O14972 297 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 ITM2AO43736 263 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 BCAS2O75934 225 aaPredicted RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PGM3O95394 542 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 APOA4P06727 396 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF24P17028 368 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 CXCR2P25025 360 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 IL1R2P27930 398 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PTGS2P35354 604 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PPARGP37231 505 aaPredicted RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 DCAF7P61962 342 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 OCA2Q04671 838 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 NIPAL4Q0D2K0 466 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TRAP1Q12931 704 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 IHHQ14623 411 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PCLAFQ15004 111 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 KCTD21Q4G0X4 260 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 ATP13A5Q4VNC0 1218 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 BOLA3Q53S33 107 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PIGGQ5H8A4 983 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 Q5PR19 223 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 LDLRAP1Q5SW96 308 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC9A4Q6AI14 798 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 MRM1Q6IN84 353 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM220Q6QAJ8 160 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 NEK10Q6ZWH5 1172 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PATL1Q86TB9 770 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 AMIGO1Q86WK6 493 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 CIARTQ8N365 385 aaPredicted RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC25A41Q8N5S1 370 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 CNTD1Q8N815 330 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 KCTD6Q8NC69 237 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TSPAN14Q8NG11 270 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 RDH11Q8TC12 318 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF157Q96PX1 679 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 SORT1Q99523 831 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 EBF4Q9BQW3 602 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 MESP1Q9BRJ9 268 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 MECRQ9BV79 373 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 SNRNP25Q9BV90 132 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 SARGQ9BW04 601 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF385DQ9H6B1 395 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PLAC1Q9HBJ0 212 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 KLHL1Q9NR64 748 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PNPLA3Q9NST1 481 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 C3orf18Q9UK00 162 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 EMCNQ9ULC0 261 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 PLCL2Q9UPR0 1127 aa6.4□□□□□ -1.38
SPTLC2-206ENST00000557566 TGP01266 2768 aa6.4□□□□□ -1.39
SPTLC2-206ENST00000557566 MEGF8Q7Z7M0 2845 aa6.4□□□□□ -1.39
SPTLC2-206ENST00000557566 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
SPTLC2-206ENST00000557566 A0A087WXM4 84 aa6.39□□□□□ -1.39
SPTLC2-206ENST00000557566 A0A1W2PQ72 361 aa6.39□□□□□ -1.39
SPTLC2-206ENST00000557566 MGAT4DA6NG13 374 aa6.39□□□□□ -1.39
SPTLC2-206ENST00000557566 CXorf49A8MYA2 514 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms