RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 AMZ1Q400G9 498 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TMTC4Q5T4D3 741 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 WDR74Q6RFH5 385 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CEACAM20Q6UY09 585 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ZBTB49Q6ZSB9 765 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CBLL1Q75N03 491 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CCDC80Q76M96 950 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 KMT5CQ86Y97 462 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ARHGEF39Q8N4T4 335 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 FAM86B1Q8N7N1 296 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 SUN3Q8TAQ9 357 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ADAMTS18Q8TE60 1221 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TANKQ92844 425 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 MAL2Q969L2 176 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 SLC35G5Q96KT7 338 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 Q9H521 79 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 COQ10BQ9H8M1 238 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 A4GALTQ9NPC4 353 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 STARD5Q9NSY2 213 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF451Q9Y4E5 1061 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TMEM131Q92545 1883 aa11.77□□□□□ -0.53
SHMT2-233ENST00000557529 NUP214P35658 2090 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-233ENST00000557529 TNRC6BQ9UPQ9 1833 aaKnown RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CACNA1EQ15878 2313 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 BLACEA4D250 179 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 FITM1A5D6W6 292 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 FAM149AA5PLN7 773 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 C5orf58C9J3I9 102 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 EMC8O43402 210 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 SUV39H1O43463 412 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CER1O95813 267 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 C8orf89P0DMQ9 161 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF26P17031 533 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 KHKP50053 298 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 XKP51811 444 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 OLR1P78380 273 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 HSD11B2P80365 405 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 EEF1A2Q05639 463 aaKnown RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 INAVAQ3KP66 663 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 PPP4R4Q6NUP7 873 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 PRSS41Q7RTY9 318 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 PATL1Q86TB9 770 aaKnown RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 ZC3H7AQ8IWR0 971 aaKnown RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 Q8N9G6 341 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 FAM181AQ8N9Y4 354 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-233ENST00000557529 NFKBIDQ8NI38 313 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CCDC74AQ96AQ1 378 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF570Q96NI8 536 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CSF3RQ99062 836 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 GAREM1Q9H706 876 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 ENAMQ9NRM1 1142 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 IRAK4Q9NWZ3 460 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 SEMA5BQ9P283 1151 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 KLHL3Q9UH77 587 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 SLC6A14Q9UN76 642 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 CLCA2Q9UQC9 943 aa11.76□□□□□ -0.53
SHMT2-233ENST00000557529 HYKKA2RU49 373 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SAC3D1A6NKF1 404 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SGK494L7N484 410 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CYR61O00622 381 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 TOX3O15405 576 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 B4GALT2O60909 372 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 PDE9AO76083 593 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SLITRK5O94991 958 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 PRSS23O95084 383 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 NSA2O95478 260 aaKnown RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CST1P01037 141 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 MT-ND1P03886 318 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 IFI6P09912 130 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 RNH1P13489 461 aaKnown RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CPMP14384 443 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 UQCRBP14927 111 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 PORP16435 677 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CD1CP29017 333 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 PPP2R1BP30154 601 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 MAGEA2P43356 314 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 AVPR1BP47901 424 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CASP9P55211 416 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SIM1P81133 766 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SHC2P98077 582 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 GNA13Q14344 377 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 GRM7Q14831 915 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 NKG7Q16617 165 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF750Q32MQ0 723 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CYBRD1Q53TN4 286 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CRB2Q5IJ48 1285 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms