RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SLC6A12P48065 614 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 IST1P53990 364 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 MTTPP55157 894 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 FOXO1Q12778 655 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 MYBPHQ13203 477 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 BMPR2Q13873 1038 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 SLC10A1Q14973 349 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 PPP1R7Q15435 360 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 MPEG1Q2M385 716 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 XKR6Q5GH73 641 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 RIPPLY2Q5TAB7 128 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 STEAP4Q687X5 459 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 TRIM40Q6P9F5 258 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 ABHD17CQ6PCB6 329 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 IL20RBQ6UXL0 311 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 CTAGE6Q86UF2 777 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 TMEM200AQ86VY9 491 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 GAS2L3Q86XJ1 694 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 TGIF2LYQ8IUE0 185 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 DND1Q8IYX4 353 aaKnown RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 PDIK1LQ8N165 341 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 TCAIMQ8N3R3 496 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 SLC15A4Q8N697 577 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 OR10Q1Q8NGQ4 319 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 PTPMT1Q8WUK0 201 aaPredicted RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 ISL2Q96A47 359 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 RHBDF1Q96CC6 855 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 WDR34Q96EX3 536 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 REXO4Q9GZR2 422 aaKnown RBP8.01□□□□□ -1.13
VRK1-206ENST00000557222 C12orf49Q9H741 205 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 POPDC3Q9HBV1 291 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 LYRM4Q9HD34 91 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 PNPLA3Q9NST1 481 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 SACM1LQ9NTJ5 587 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 QPCTLQ9NXS2 382 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 DAPP1Q9UN19 280 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 L3MBTL1Q9Y468 752 aa8.01□□□□□ -1.13
VRK1-206ENST00000557222 HRNRQ86YZ3 2850 aaPredicted RBP8□□□□□ -1.13
VRK1-206ENST00000557222 PINLYPA6NC86 204 aa8□□□□□ -1.13
VRK1-206ENST00000557222 SYT5O00445 386 aa8□□□□□ -1.13
VRK1-206ENST00000557222 PAX4O43316 350 aa8□□□□□ -1.13
VRK1-206ENST00000557222 NRDCO43847 1150 aa8□□□□□ -1.13
VRK1-206ENST00000557222 P04436 131 aa8□□□□□ -1.13
VRK1-206ENST00000557222 IFNA16P05015 189 aa8□□□□□ -1.13
VRK1-206ENST00000557222 SAT1P21673 171 aa8□□□□□ -1.13
VRK1-206ENST00000557222 HNRNPH1P31943 449 aaKnown RBP8□□□□□ -1.13
VRK1-206ENST00000557222 KCNC1P48547 511 aa8□□□□□ -1.13
VRK1-206ENST00000557222 MAN2A2P49641 1150 aa8□□□□□ -1.13
VRK1-206ENST00000557222 HK2P52789 917 aa8□□□□□ -1.13
VRK1-206ENST00000557222 LIM2P55344 173 aa8□□□□□ -1.13
VRK1-206ENST00000557222 RNF4P78317 190 aa8□□□□□ -1.13
VRK1-206ENST00000557222 STX4Q12846 297 aa8□□□□□ -1.13
VRK1-206ENST00000557222 LAPTM5Q13571 262 aa8□□□□□ -1.13
VRK1-206ENST00000557222 SLBPQ14493 270 aaKnown RBP eCLIP8□□□□□ -1.13
VRK1-206ENST00000557222 MORF4L2Q15014 288 aa8□□□□□ -1.13
VRK1-206ENST00000557222 KCTD19Q17RG1 926 aaPredicted RBP8□□□□□ -1.13
VRK1-206ENST00000557222 PIGGQ5H8A4 983 aa8□□□□□ -1.13
VRK1-206ENST00000557222 WLSQ5T9L3 541 aa8□□□□□ -1.13
VRK1-206ENST00000557222 RTL6Q6ICC9 239 aa8□□□□□ -1.13
VRK1-206ENST00000557222 ZNF585AQ6P3V2 769 aa8□□□□□ -1.13
VRK1-206ENST00000557222 ARSKQ6UWY0 536 aa8□□□□□ -1.13
VRK1-206ENST00000557222 LRRC8AQ8IWT6 810 aa8□□□□□ -1.13
VRK1-206ENST00000557222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8□□□□□ -1.13
VRK1-206ENST00000557222 RPRMLQ8N4K4 120 aa8□□□□□ -1.13
VRK1-206ENST00000557222 TMEM251Q8N6I4 163 aa8□□□□□ -1.13
VRK1-206ENST00000557222 NUBPLQ8TB37 319 aa8□□□□□ -1.13
VRK1-206ENST00000557222 MBD6Q96DN6 1003 aa8□□□□□ -1.13
VRK1-206ENST00000557222 LRRC46Q96FV0 321 aa8□□□□□ -1.13
VRK1-206ENST00000557222 MS4A14Q96JA4 679 aa8□□□□□ -1.13
VRK1-206ENST00000557222 VPS39Q96JC1 886 aa8□□□□□ -1.13
VRK1-206ENST00000557222 SCYL1Q96KG9 808 aa8□□□□□ -1.13
VRK1-206ENST00000557222 KCNC2Q96PR1 638 aa8□□□□□ -1.13
VRK1-206ENST00000557222 EGFL8Q99944 293 aa8□□□□□ -1.13
VRK1-206ENST00000557222 TBCDQ9BTW9 1192 aa8□□□□□ -1.13
VRK1-206ENST00000557222 EFCAB11Q9BUY7 163 aa8□□□□□ -1.13
VRK1-206ENST00000557222 ALOXE3Q9BYJ1 711 aa8□□□□□ -1.13
VRK1-206ENST00000557222 CNOT10Q9H9A5 744 aaKnown RBP8□□□□□ -1.13
VRK1-206ENST00000557222 PLAC1Q9HBJ0 212 aa8□□□□□ -1.13
VRK1-206ENST00000557222 ACKR4Q9NPB9 350 aa8□□□□□ -1.13
VRK1-206ENST00000557222 PPANQ9NQ55 473 aaKnown RBP8□□□□□ -1.13
VRK1-206ENST00000557222 NSMCE4AQ9NXX6 385 aa8□□□□□ -1.13
VRK1-206ENST00000557222 CTNNAL1Q9UBT7 734 aa8□□□□□ -1.13
VRK1-206ENST00000557222 IKZF3Q9UKT9 509 aa8□□□□□ -1.13
VRK1-206ENST00000557222 ACAD8Q9UKU7 415 aa8□□□□□ -1.13
VRK1-206ENST00000557222 FAM215AQ9Y5M1 114 aa8□□□□□ -1.13
VRK1-206ENST00000557222 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 DNHD1Q96M86 4753 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 A0A0G2JNJ9 132 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 HSPB2A8KAH6 182 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 FAM166BA8MTA8 275 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 WWP2O00308 870 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 CDC7O00311 574 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 CLGNO14967 610 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 WDR47O94967 919 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 GOSR1O95249 250 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 TBX6O95947 436 aaPredicted RBP7.99□□□□□ -1.13
VRK1-206ENST00000557222 COX7A2P14406 83 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 IVDP26440 423 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 PPP2R1BP30154 601 aa7.99□□□□□ -1.13
VRK1-206ENST00000557222 SERPINB1P30740 379 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms