RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NFAM1Q8NET5 270 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-222ENST00000556768 ASB15Q8WXK1 588 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 NCLNQ969V3 563 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 MTBPQ96DY7 904 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 SCMH1Q96GD3 660 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 ART5Q96L15 291 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 QRFPRQ96P65 431 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 DGAT2Q96PD7 388 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 MRPL57Q9BQC6 102 aaKnown RBP6.83□□□□□ -1.32
SCFD1-222ENST00000556768 SPATA9Q9BWV2 254 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 FUT8Q9BYC5 575 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 OR8D2Q9GZM6 311 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 NOL11Q9H8H0 719 aaKnown RBP6.83□□□□□ -1.32
SCFD1-222ENST00000556768 NMRK1Q9NWW6 199 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 HPF1Q9NWY4 346 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 PSD3Q9NYI0 1048 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 ZNF180Q9UJW8 692 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 NPIPA1Q9UND3 350 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 PPIEQ9UNP9 301 aaKnown RBP6.83□□□□□ -1.32
SCFD1-222ENST00000556768 TSC22D4Q9Y3Q8 395 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 FER1L5A0AVI2 2057 aa6.83□□□□□ -1.32
SCFD1-222ENST00000556768 TNRC6AQ8NDV7 1962 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 IQANK1A0A1B0GTG1 560 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 HMX2A2RU54 273 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 C17orf105B2RV13 164 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 C4orf51C9J302 202 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 FOXE1O00358 373 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PRRG2O14669 202 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 TFECO14948 347 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ASNA1O43681 348 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 KLK8O60259 260 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 NME2P1O60361 137 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 OR10H2O60403 315 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PRAMEF4O60810 478 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 LDB3O75112 727 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 GUCY1B2O75343 617 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ABOP16442 354 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 EPORP19235 508 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 TAC1P20366 129 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 GMPRP36959 345 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 TDGF1P3P51864 188 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 SMSP52788 366 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PMP22Q01453 160 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 CUL3Q13618 768 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 TEX35Q5T0J7 233 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PRAMEF9Q5VWM5 478 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ADNP2Q6IQ32 1131 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PAOXQ6QHF9 649 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ZCCHC7Q8N3Z6 543 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PTGR2Q8N8N7 351 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 OR8K3Q8NH51 312 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 RELTQ969Z4 430 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 SGCZQ96LD1 299 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 GPR137Q96N19 417 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 SERPINI1Q99574 410 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 MAPKAP1Q9BPZ7 522 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 PELOQ9BRX2 385 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 AICDAQ9GZX7 198 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 MRPL46Q9H2W6 279 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ELOVL6Q9H5J4 265 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 TRIM45Q9H8W5 580 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 DMRT3Q9NQL9 472 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 LYARQ9NX58 379 aaKnown RBP6.82□□□□□ -1.32
SCFD1-222ENST00000556768 KCMF1Q9P0J7 381 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 NFU1Q9UMS0 254 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ASB1Q9Y576 335 aa6.82□□□□□ -1.32
SCFD1-222ENST00000556768 ADGRG4Q8IZF6 3080 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 HEATR5BQ9P2D3 2071 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 ASPDHA6ND91 283 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 TRIM49D1C9J1S8 452 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 STX16-NPEPL1H3BU86 382 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 STX16O14662 325 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 MAN1A2O60476 641 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 ZG16O60844 167 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 OR2J2O76002 312 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 SCELO95171 688 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 HTR3BO95264 441 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 SIX3O95343 332 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-222ENST00000556768 TBX6O95947 436 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-222ENST00000556768 OTCP00480 354 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 MST1P26927 711 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 RPS13P62277 151 aaKnown RBP6.81□□□□□ -1.32
SCFD1-222ENST00000556768 ZRSR2Q15696 482 aaKnown RBP6.81□□□□□ -1.32
SCFD1-222ENST00000556768 C6orf163Q5TEZ5 329 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 FRG2Q64ET8 278 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 OPN5Q6U736 354 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 IL20RBQ6UXL0 311 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 RPTNQ6XPR3 784 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 GOLGA7Q7Z5G4 137 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 MILR1Q7Z6M3 343 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 LCA5Q86VQ0 697 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 NUDT13Q86X67 352 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 SPPL2CQ8IUH8 684 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 AMER2Q8N7J2 671 aa6.81□□□□□ -1.32
SCFD1-222ENST00000556768 L3MBTL4Q8NA19 623 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms