RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ERAL1O75616 437 aaKnown RBP16.32■□□□□ 0.2
TUBB3-211ENST00000556536 SLC22A3O75751 556 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 LAMP1P11279 417 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 COX7A2P14406 83 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 CD1EP15812 388 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 MRPL19P49406 292 aaKnown RBP16.32■□□□□ 0.2
TUBB3-211ENST00000556536 ATP4BP51164 291 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 STX1BP61266 288 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 IGLV3-21P80748 117 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-211ENST00000556536 DUSP2Q05923 314 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 STX4Q12846 297 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 IL10RAQ13651 578 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 SQLEQ14534 574 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 NSDHLQ15738 373 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 FAM9CQ8IZT9 166 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 CPSF7Q8N684 471 aaKnown RBP16.32■□□□□ 0.2
TUBB3-211ENST00000556536 PPCDCQ96CD2 204 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 CNRIP1Q96F85 164 aaPredicted RBP16.32■□□□□ 0.2
TUBB3-211ENST00000556536 ZNF681Q96N22 645 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 ALOXE3Q9BYJ1 711 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 DPH1Q9BZG8 443 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 CLMPQ9H6B4 373 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 SAR1AQ9NR31 198 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 SEMA3GQ9NS98 782 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 TAS2R7Q9NYW3 318 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 ZIM2Q9NZV7 527 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 SH3BP4Q9P0V3 963 aa16.32■□□□□ 0.2
TUBB3-211ENST00000556536 A0A087WV48 116 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 TCRBV16S1A1N1A0A5B0 115 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 EFSO43281 561 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 CREG1O75629 220 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 PIK3R1P27986 724 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 OTX2P32243 289 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 FEN1P39748 380 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 EIF2S3P41091 472 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 ZFP36L2P47974 494 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 XKP51811 444 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 C19orf57Q0VDD7 668 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 PGS1Q32NB8 556 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 R3HCC1LQ7Z5L2 792 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 PPP1R32Q7Z5V6 425 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 ANKRD37Q7Z713 158 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 STARD8Q92502 1023 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 CIDECQ96AQ7 238 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 PPWD1Q96BP3 646 aaKnown RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 C8orf44Q96CB5 159 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 COQ8BQ96D53 544 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 MTERF3Q96E29 417 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 ZNF764Q96H86 408 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 UBL7Q96S82 380 aaPredicted RBP16.31■□□□□ 0.2
TUBB3-211ENST00000556536 NMUR2Q9GZQ4 415 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 PSME2Q9UL46 239 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 ARL2BPQ9Y2Y0 163 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 HS3ST3B1Q9Y662 390 aa16.31■□□□□ 0.2
TUBB3-211ENST00000556536 ACACAQ13085 2346 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 IGHV3-20A0A0C4DH32 117 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 FCHO1O14526 889 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 SOCS6O14544 535 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 CYC1P08574 325 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 EFNA1P20827 205 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-211ENST00000556536 MMP11P24347 488 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 PTGER1P34995 402 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 RPL3P39023 403 aaKnown RBP16.3■□□□□ 0.2
TUBB3-211ENST00000556536 DGKQP52824 942 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
TUBB3-211ENST00000556536 SSPNQ14714 243 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 SPANXN4Q5MJ08 99 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 CPTPQ5TA50 214 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 GKAP1Q5VSY0 366 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-211ENST00000556536 DGAT2L6Q6ZPD8 337 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 MTDHQ86UE4 582 aaKnown RBP16.3■□□□□ 0.2
TUBB3-211ENST00000556536 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 AMER2Q8N7J2 671 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 METTL21AQ8WXB1 218 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 TESCQ96BS2 214 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 SLAMF7Q9NQ25 335 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 ZNF780BQ9Y6R6 833 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 APC2O95996 2303 aa16.3■□□□□ 0.2
TUBB3-211ENST00000556536 A8MUA0 341 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 MYO1GB0I1T2 1018 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 NDUFAB1O14561 156 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 NKX2-8O15522 239 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 IGHEP01854 428 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SLC35E2P0CK97 266 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CPMP14384 443 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 PCSK2P16519 638 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CSNK2A2P19784 350 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 STT3AP46977 705 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 OR4D2P58180 307 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 PHC1P78364 1004 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 IRX1P78414 480 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 CBX1P83916 185 aa16.29■□□□□ 0.2
TUBB3-211ENST00000556536 EEF1A2Q05639 463 aaKnown RBP16.29■□□□□ 0.2
TUBB3-211ENST00000556536 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms