RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ELMOD1Q8N336 334 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 METTL4Q8N3J2 472 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 FBXW8Q8N3Y1 598 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 C11orf42Q8N5U0 333 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 PSMA8Q8TAA3 256 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 ST7LQ8TDW4 575 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 GANCQ8TET4 914 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 SSC4DQ8WTU2 575 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 LIPHQ8WWY8 451 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 PRCCQ92733 491 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-218ENST00000556256 SLCO4A1Q96BD0 722 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 EEF2KMTQ96G04 330 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 UBAC1Q9BSL1 405 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 ACAT2Q9BWD1 397 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 TMEM245Q9H330 911 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 TUBB1Q9H4B7 451 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 C3orf14Q9HBI5 128 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 MED17Q9NVC6 651 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 PLEK2Q9NYT0 353 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 HMG20BQ9P0W2 317 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 TRMT6Q9UJA5 497 aaKnown RBP2.35□□□□□ -2.03
SCFD1-218ENST00000556256 IKZF3Q9UKT9 509 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 SLC6A5Q9Y345 797 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 KNSTRNQ9Y448 316 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 OR1A2Q9Y585 309 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 STYXL1Q9Y6J8 313 aa2.35□□□□□ -2.03
SCFD1-218ENST00000556256 TRBV5-4A0A0C4DH59 114 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ARHGEF33A8MVX0 844 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 TCP10L2B9ZVM9 353 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 INPP4BO15327 924 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 PHF1O43189 567 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ABHD2P08910 425 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 CPA3P15088 417 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 B4GALT1P15291 398 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 AOC1P19801 751 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 HLA-DPA1P20036 260 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 GPX3P22352 226 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 STARD6P59095 220 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 FKBP3Q00688 224 aaKnown RBP2.34□□□□□ -2.03
SCFD1-218ENST00000556256 FCHO2Q0JRZ9 810 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 HSPA14Q0VDF9 509 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 HEPACAMQ14CZ8 416 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF146Q15072 292 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 RABEPKQ7Z6M1 372 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ITIH5Q86UX2 942 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 WDR49Q8IV35 697 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 OR6F1Q8NGZ6 308 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 SPPL2AQ8TCT8 520 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 NPRL2Q8WTW4 380 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 UBTD2Q8WUN7 234 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ATP6V0A1Q93050 837 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 GLYATL1Q969I3 302 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 DTD2Q96FN9 168 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 RAB40CQ96S21 281 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 AGPAT1Q99943 283 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 DPEP3Q9H4B8 488 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 ACOXLQ9NUZ1 547 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 TECRQ9NZ01 308 aaKnown RBP2.34□□□□□ -2.03
SCFD1-218ENST00000556256 TRIM10Q9UDY6 481 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 BAIAP2L1Q9UHR4 511 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 TEKT2Q9UIF3 430 aa2.34□□□□□ -2.03
SCFD1-218ENST00000556256 TDRD6O60522 2096 aaKnown RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 KIAA1217Q5T5P2 1943 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 IGLV4-3A0A075B6K6 122 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 SH3PXD2BA1X283 911 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 SLC9B1P1A6NJY1 282 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 ZNF724A8MTY0 619 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 TLR4O00206 839 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 B4GAT1O43505 415 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 PRDM1O75626 825 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 POP4O95707 220 aaKnown RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 TXNDC12O95881 172 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 GAS8O95995 478 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 IGHG1P01857 330 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 MT-ND3P03897 115 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 FHP07954 510 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 SERPINF2P08697 491 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 UGT1A6P19224 532 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 OXTRP30559 389 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 TSTA3Q13630 321 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 GCKRQ14397 625 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 KNOP1Q1ED39 458 aaKnown RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 WSCD2Q2TBF2 565 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 MS4A18Q3C1V0 323 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 TATDN1Q6P1N9 297 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 CCBE1Q6UXH8 406 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 DLEU7Q6UYE1 221 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 C1orf186Q6ZWK4 172 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 Q71RC1 249 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 FAM131BQ86XD5 332 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 CCDC197Q8NCU1 140 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 OR4L1Q8NH43 312 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 OR4A16Q8NH70 328 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 GOLGA5Q8TBA6 731 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 NABP1Q96AH0 204 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 MRPL53Q96EL3 112 aaKnown RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 ZNF274Q96GC6 653 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-218ENST00000556256 PCED1BQ96HM7 432 aa2.33□□□□□ -2.04
SCFD1-218ENST00000556256 GPR137Q96N19 417 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms