RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 A6NHS1 94 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 WASHC1A8K0Z3 465 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 B3GALT2O43825 422 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 PRAMEF10O60809 474 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ALPLP05186 524 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ALOX12P18054 663 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 MPIP34949 423 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 GPC1P35052 558 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 DCTP40126 519 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 DHPSP49366 369 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-205ENST00000556096 PPP1CAP62136 330 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 KCNJ10P78508 379 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 TNFRSF17Q02223 184 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 RUNX2Q13950 521 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 OR2T5Q6IEZ7 315 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 REEP3Q6NUK4 255 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 BHLHB9Q6PI77 547 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF438Q7Z4V0 828 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
VPS33B-205ENST00000556096 HIPK1Q86Z02 1210 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 SAMD14Q8IZD0 417 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-205ENST00000556096 DHRSXQ8N5I4 330 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 METTL25Q8N6Q8 603 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 OR2T29Q8NH02 315 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 KLHL6Q8WZ60 621 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 C7orf34Q96L11 122 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 C10orf90Q96M02 699 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF681Q96N22 645 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 LYRM4Q9HD34 91 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 DAPP1Q9UN19 280 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF451Q9Y4E5 1061 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF780BQ9Y6R6 833 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 TMEM131Q92545 1883 aa13.89□□□□□ -0.19
VPS33B-205ENST00000556096 M0QX08 132 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 BCAT2O15382 392 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 SH3BP5O60239 455 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 PROS1P07225 676 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 ST6GAL1P15907 406 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 CPN2P22792 545 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 AQP1P29972 269 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 CSNK1EP49674 416 aaKnown RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 AFF3P51826 1226 aaKnown RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 LIM2P55344 173 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 C21orf59P57076 290 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 SNRPNP63162 240 aaKnown RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 VLDLRP98155 873 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 PLK5Q496M5 336 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 IQCCQ4KMZ1 466 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 DEFB134Q4QY38 66 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 OTUD3Q5T2D3 398 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 DGLUCYQ7Z3D6 616 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 ZCCHC10Q8TBK6 192 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 LZICQ8WZA0 190 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 TPD52L3Q96J77 140 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 SLC38A3Q99624 504 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 PRRX2Q99811 253 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 RBM4BQ9BQ04 359 aaKnown RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 RBM4Q9BWF3 364 aaKnown RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 OSBPL10Q9BXB5 764 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 IFT80Q9P2H3 777 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-205ENST00000556096 ABCG2Q9UNQ0 655 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 SLC22A7Q9Y694 548 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
VPS33B-205ENST00000556096 H0YAE9 185 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 PIAS2O75928 621 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 SMNDC1O75940 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TNFAIP8O95379 198 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TFPTP0C1Z6 253 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CDH3P22223 829 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 MYF6P23409 242 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TLX1P31314 330 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CAPGP40121 348 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CAPZBP47756 277 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 IST1P53990 364 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 PPP2R2BQ00005 443 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 GK3PQ14409 553 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 PMS2CLQ68D20 193 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 OR52E8Q6IFG1 317 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TNFAIP8L2Q6P589 184 aaPredicted RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 SHQ1Q6PI26 577 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CCDC116Q8IYX3 515 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 CSNK1A1LQ8N752 337 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 C19orf47Q8N9M1 422 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 TAMM41Q96BW9 452 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 SLC35G5Q96KT7 338 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ERVMER34-1Q9H9K5 563 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 ZCCHC3Q9NUD5 404 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 HMGN4O00479 90 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 E2F6O75461 281 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 EIF2S1P05198 315 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 THRBP10828 461 aa13.87□□□□□ -0.19
VPS33B-205ENST00000556096 FEN1P39748 380 aaKnown RBP13.87□□□□□ -0.19
VPS33B-205ENST00000556096 PLA2G5P39877 138 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms