RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PSMF1Q92530 271 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 GAL3ST3Q96A11 431 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RGMAQ96B86 450 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 TBC1D20Q96BZ9 403 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 KCNC2Q96PR1 638 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 LRRC37BQ96QE4 947 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 TUBB6Q9BUF5 446 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RBCK1Q9BYM8 510 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 ROGDIQ9GZN7 287 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 REXO4Q9GZR2 422 aaKnown RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 AICDAQ9GZX7 198 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 EPS8L2Q9H6S3 715 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 C19orf25Q9UFG5 118 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 CSAG2Q9Y5P2 127 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 MDC1Q14676 2089 aaKnown RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 ARHGAP10A1A4S6 786 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 CCT8L1PA6NM43 557 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SAP18O00422 153 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ERI3O43414 337 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 CHST10O43529 356 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SH3BGRLO75368 114 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ETHE1O95571 254 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 B3GALT4O96024 378 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 FHP07954 510 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 CELA2AP08217 269 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SMIM10L1P0DMW3 83 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 JAK1P23458 1154 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 HNRNPH1P31943 449 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SSR2P43308 183 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 TSFMP43897 325 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 OLR1P78380 273 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 TBL3Q12788 808 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ADPRMQ3LIE5 342 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 PLEKHN1Q494U1 663 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 RFTN2Q52LD8 501 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 TOR1AIP1Q5JTV8 583 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 B3GNTL1Q67FW5 361 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 PLAG1Q6DJT9 500 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 GALNT18Q6P9A2 607 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 TRPM8Q7Z2W7 1104 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 CPEB2Q7Z5Q1 589 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ANKRD37Q7Z713 158 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 MTDHQ86UE4 582 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 NUDT13Q86X67 352 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 METTL4Q8N3J2 472 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 C1orf52Q8N6N3 182 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 BRIX1Q8TDN6 353 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 CHTF18Q8WVB6 975 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 PEX11GQ96HA9 241 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SMIM10Q96HG1 83 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 F2RL3Q96RI0 385 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 LMF1Q96S06 567 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 BARD1Q99728 777 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 TBCDQ9BTW9 1192 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 C1orf50Q9BV19 199 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 RNF32Q9H0A6 362 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 COPS7BQ9H9Q2 264 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ASIC5Q9NY37 505 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 GIMAP2Q9UG22 337 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 ADAM29Q9UKF5 820 aa9.03□□□□□ -0.96
ACTN1-215ENST00000555616 POLR3HQ9Y535 204 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-215ENST00000555616 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 GNG14A0A1W2PPG7 69 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 OR2W5A6NFC9 320 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PLPP1O14494 284 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 FCHO1O14526 889 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 SLC22A2O15244 555 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PCDH7O60245 1069 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 DNAJB6O75190 326 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 CDC123O75794 336 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 SEC24DO94855 1032 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 TBX6O95947 436 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ANXA4P09525 319 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ITGAMP11215 1152 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PRPS2P11908 318 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 RNH1P13489 461 aaKnown RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ICAM2P13598 275 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ADSLP30566 484 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 GSTM5P46439 218 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ASMTP46597 345 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 UQCRFS1P47985 274 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ATP4BP51164 291 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 PLA2G16P53816 162 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 HNRNPH2P55795 449 aaKnown RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 RAB8AP61006 207 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 SQLEQ14534 574 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ZNF169Q14929 603 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-215ENST00000555616 TLR1Q15399 786 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 EXT1Q16394 746 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 TMEM198Q66K66 360 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 OR4C11Q6IEV9 310 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 NOXRED1Q6NXP6 359 aa9.02□□□□□ -0.97
ACTN1-215ENST00000555616 ABHD17CQ6PCB6 329 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms