RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 A0A1W2PS29 197 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SH3BP5O60239 455 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 MASP1P48740 699 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 NFATC3Q12968 1075 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SLC9A5Q14940 896 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SLC16A12Q6ZSM3 486 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 AMIGO1Q86WK6 493 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 OR5D16Q8NGK9 328 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 LCN9Q8WX39 176 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 FCRL4Q96PJ5 515 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SARGQ9BW04 601 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 COLEC10Q9Y6Z7 277 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 DNAH14Q0VDD8 3507 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SCN3AQ9NY46 2000 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SEMA7AO75326 666 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 OR12D1P0DN82 309 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 ALPPL2P10696 532 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 ANXA8P13928 327 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 ZNF182P17025 639 aaPredicted RBP22.98■■□□□ 1.27
TMEM260-207ENST00000555497 DDX5P17844 614 aaKnown RBP22.98■■□□□ 1.27
TMEM260-207ENST00000555497 NDUFV2P19404 249 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 CCNA2P20248 432 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 RAB8AP61006 207 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SNRPNP63162 240 aaKnown RBP22.98■■□□□ 1.27
TMEM260-207ENST00000555497 PROX2Q3B8N5 592 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 C18orf63Q68DL7 685 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 WFDC6Q9BQY6 131 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 TMEM168Q9H0V1 697 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 SCN3BQ9NY72 215 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 EHD3Q9NZN3 535 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 WARS2Q9UGM6 360 aaKnown RBP22.98■■□□□ 1.27
TMEM260-207ENST00000555497 HEBP2Q9Y5Z4 205 aa22.98■■□□□ 1.27
TMEM260-207ENST00000555497 ZNF99A8MXY4 864 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 BTN3A3O00478 584 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 FAM20BO75063 409 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 MT-ND2P03891 347 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 POU2F1P14859 743 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 RHCEP18577 417 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 NR4A1P22736 598 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 CERS1P27544 350 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 CMPK1P30085 196 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 GGT2P36268 569 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 NCBP2P52298 156 aaKnown RBP eCLIP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 GPR19Q15760 415 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 SYPL1Q16563 259 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 OLIG3Q7RTU3 272 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 DGLUCYQ7Z3D6 616 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 SZRD1Q7Z422 152 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 MFSD9Q8NBP5 474 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 ZNF540Q8NDQ6 660 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 OR2L5Q8NG80 312 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 DNASE1L2Q92874 299 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 OTUB1Q96FW1 271 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 MSLNLQ96KJ4 702 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 OR51I1Q9H343 314 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 KLF15Q9UIH9 416 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 FBXW2Q9UKT8 454 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 FAM32AQ9Y421 112 aaKnown RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 ARHGEF17Q96PE2 2063 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 NOL3O60936 208 aaKnown RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 ERAL1O75616 437 aaKnown RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 GADD45GO95257 159 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 IFNW1P05000 195 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 ACADMP11310 421 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 ACVR2AP27037 513 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 PXNP49023 591 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 EMP3P54852 163 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 RAB2BQ8WUD1 216 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 CNRIP1Q96F85 164 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-207ENST00000555497 WDR92Q96MX6 357 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 FAIM2Q9BWQ8 316 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 POFUT2Q9Y2G5 429 aa22.97■■□□□ 1.27
TMEM260-207ENST00000555497 NDUFS2O75306 463 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 AIFM1O95831 613 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 GPC1P35052 558 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 HPCAP84074 193 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 OR4D11Q8NGI4 311 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 SUN3Q8TAQ9 357 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 GPN2Q9H9Y4 310 aaPredicted RBP22.96■■□□□ 1.27
TMEM260-207ENST00000555497 FAM227AF5H4B4 570 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 TPMTP51580 245 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 KCNC4Q03721 635 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 AQP6Q13520 282 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 RBM45Q8IUH3 476 aaKnown RBP22.96■■□□□ 1.27
TMEM260-207ENST00000555497 RPLP0P6Q8NHW5 317 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 SLC35G5Q96KT7 338 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 BBS4Q96RK4 519 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 ZCCHC3Q9NUD5 404 aaKnown RBP22.96■■□□□ 1.27
TMEM260-207ENST00000555497 OR6C2Q9NZP2 312 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 KCND3Q9UK17 655 aa22.96■■□□□ 1.27
TMEM260-207ENST00000555497 FANCMQ8IYD8 2048 aa22.95■■□□□ 1.27
TMEM260-207ENST00000555497 SLC28A2O43868 658 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 ZBTB11O95625 1053 aaPredicted RBP22.95■■□□□ 1.26
TMEM260-207ENST00000555497 C8orf89P0DMQ9 161 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 RANBP1P43487 201 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 BNIP3Q12983 259 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 COMTD1Q86VU5 262 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 PAQR7Q86WK9 346 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 XAGE5Q8WWM1 108 aa22.95■■□□□ 1.26
TMEM260-207ENST00000555497 GTPBP3Q969Y2 492 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms