RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NGBQ9NPG2 151 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ENTPD4Q9Y227 616 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 EXOGQ9Y2C4 368 aaKnown RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 PLEKHA6Q9Y2H5 1048 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 MYH15Q9Y2K3 1946 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 TMEM89A2RUT3 159 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 OR5H15A6NDH6 313 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 K7EQD1 137 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 PTBP3O95758 552 aaKnown RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 TBX6O95947 436 aaPredicted RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 APRTP07741 180 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 DESP17661 470 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 CALRP27797 417 aaKnown RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 PKLRP30613 574 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 ID1P41134 155 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 NUMBP49757 651 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 CDKL1Q00532 357 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 P2RY14Q15391 338 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 DCAF12Q5T6F0 453 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 ZCCHC12Q6PEW1 402 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 Q6ZRG5 221 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 CDHR3Q6ZTQ4 885 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 TMEM26Q6ZUK4 368 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 TBC1D10CQ8IV04 446 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 ZNF614Q8N883 585 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 OR10G7Q8NGN6 311 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 U2AF1L4Q8WU68 220 aaKnown RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 FCGR1BQ92637 280 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 C16orf58Q96GQ5 468 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 ATXN7L3BQ96GX2 97 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 COG3Q96JB2 828 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 JPH2Q9BR39 696 aaPredicted RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 CXXC4Q9H2H0 198 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 TMEM231Q9H6L2 316 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 SOHLH2Q9NX45 425 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 TMEM181Q9P2C4 612 aa4.52□□□□□ -1.69
VRK1-205ENST00000555402 MRPS18CQ9Y3D5 142 aaKnown RBP4.52□□□□□ -1.69
VRK1-205ENST00000555402 UBE4BO95155 1302 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 FGD5Q6ZNL6 1462 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 NEDD8-MDP1E9PL57 170 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 TFECO14948 347 aaPredicted RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 EDIL3O43854 480 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 TRIM16O95361 564 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 CD1DP15813 335 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 EDNRAP25101 427 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 NDST2P52849 883 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 RPL27P61353 136 aaKnown RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 NME3Q13232 169 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 KIAA0141Q14154 515 aaPredicted RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 CEBPEQ15744 281 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 ECSCRQ19T08 205 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 FASTKD1Q53R41 847 aaKnown RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 HSP90AA5PQ58FG0 334 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 LDLRAP1Q5SW96 308 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 NEPROQ6NW34 567 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 ADGRD2Q7Z7M1 963 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 OR4N5Q8IXE1 308 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 METTL4Q8N3J2 472 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 OR6F1Q8NGZ6 308 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 CCDC110Q8TBZ0 833 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 PHYHIPQ92561 330 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 ALKBH3Q96Q83 286 aaPredicted RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 CBWD1Q9BRT8 395 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 UPF3AQ9H1J1 476 aaKnown RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 NMUR1Q9HB89 426 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 SLC25A19Q9HC21 320 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 CNOT2Q9NZN8 540 aaKnown RBP4.51□□□□□ -1.69
VRK1-205ENST00000555402 RNF215Q9Y6U7 377 aa4.51□□□□□ -1.69
VRK1-205ENST00000555402 ATP8B3O60423 1300 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 LOC105371242A0A075B767 164 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 RGSL1A5PLK6 1076 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 G3V2L1 256 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 CSDE1O75534 798 aaKnown RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 AKR7A3O95154 331 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 PDGFBP01127 241 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 ZSCAN5DPP0CG00 497 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 ADORA3P0DMS8 318 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 RALAP11233 206 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 PPP2R1AP30153 589 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 FCGR2BP31994 310 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 FCGR2CP31995 323 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 HPDP32754 393 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 ATP12AP54707 1039 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 TMEM50BP56557 158 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 HTD2P86397 168 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 NECTIN1Q15223 517 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 MLF2Q15773 248 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 KNOP1Q1ED39 458 aaKnown RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 MOGAT2Q3SYC2 334 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 DNAJC21Q5F1R6 531 aaKnown RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 IL23RQ5VWK5 629 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 CWC27Q6UX04 472 aaKnown RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 OLFM4Q6UX06 510 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 C3P1Q6ZMU1 363 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 ASRGL1Q7L266 308 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms