RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TMEM156Q8N614 296 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 APCDD1LQ8NCL9 501 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 OR4K14Q8NGD5 310 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 SLC2A12Q8TD20 617 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 PTPMT1Q8WUK0 201 aaPredicted RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 TMEM125Q96AQ2 219 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 CNPPD1Q9BV87 410 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 CLMPQ9H6B4 373 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 TEX10Q9NXF1 929 aaPredicted RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 ANKRD10Q9NXR5 420 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 PSME2Q9UL46 239 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 PPIEQ9UNP9 301 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 FIS1Q9Y3D6 152 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 C1orf226A1L170 272 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 AZIN1O14977 448 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 NPHS1O60500 1241 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 NEFHP12036 1026 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 SERPINB5P36952 375 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 CYB561P49447 251 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 SSR4P51571 173 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 FOXA1P55317 472 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 MLF1P58340 268 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 BCORP1Q8N888 145 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 TMEM178AQ8NBL3 297 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 FAM98AQ8NCA5 519 aaKnown RBP11.27□□□□□ -0.61
SRP54-206ENST00000555317 GALNT11Q8NCW6 608 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 OR5L2Q8NGL0 311 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 CDC26Q8NHZ8 85 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 CHTF18Q8WVB6 975 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 RIT1Q92963 219 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 PPWD1Q96BP3 646 aaKnown RBP11.27□□□□□ -0.61
SRP54-206ENST00000555317 KLHL29Q96CT2 875 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 SNRNP40Q96DI7 357 aaKnown RBP11.27□□□□□ -0.61
SRP54-206ENST00000555317 MECRQ9BV79 373 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 SSU72Q9NP77 194 aaKnown RBP11.27□□□□□ -0.61
SRP54-206ENST00000555317 KCNK9Q9NPC2 374 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 PFDN4Q9NQP4 134 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 GIMAP4Q9NUV9 329 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 ASF1BQ9NVP2 202 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 LRFN1Q9P244 771 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 ZNF780BQ9Y6R6 833 aa11.27□□□□□ -0.61
SRP54-206ENST00000555317 ZGRF1Q86YA3 2104 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 SERTM1A2A2V5 107 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 PGRMC2O15173 223 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 TM9SF1O15321 606 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 RGS14O43566 566 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 TYROBPO43914 113 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 MAN1A2O60476 641 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ITGA10O75578 1167 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ERAL1O75616 437 aaKnown RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 SLC25A12O75746 678 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 RSL1D1O76021 490 aaKnown RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 RASAL1O95294 804 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 DDAH2O95865 285 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 CRYABP02511 175 aaKnown RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 SLC35E2P0CK97 266 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 CHN1P15882 459 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 SERPINB3P29508 390 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 TIA1P31483 386 aaKnown RBP eCLIP11.26□□□□□ -0.61
SRP54-206ENST00000555317 CD96P40200 585 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 GSTM5P46439 218 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 XKP51811 444 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ZNF267Q14586 743 aaPredicted RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 FAM219BQ5XKK7 198 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 CLEC6AQ6EIG7 209 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 RNF111Q6ZNA4 994 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 SLC29A4Q7RTT9 530 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 NUDCD3Q8IVD9 361 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 GALNT12Q8IXK2 581 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ASB15Q8WXK1 588 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ZBTB9Q96C00 473 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 C19orf60Q96EN9 201 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 PGM2Q96G03 612 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 SENP5Q96HI0 755 aaPredicted RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 FBXL20Q96IG2 436 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 NPAS2Q99743 824 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 EBPLQ9BY08 206 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 KLHL1Q9NR64 748 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 OLAHQ9NV23 265 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ERVK-11Q9UQG0 969 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 YARS2Q9Y2Z4 477 aaKnown RBP11.26□□□□□ -0.61
SRP54-206ENST00000555317 PCDHA9Q9Y5H5 950 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 ACTL7BQ9Y614 415 aa11.26□□□□□ -0.61
SRP54-206ENST00000555317 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 A8MVJ9 347 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SLC28A1O00337 649 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 OR2J2O76002 312 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ZWINTO95229 277 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 BPGMP07738 259 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 IL3P08700 152 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ANXA4P09525 319 aaPredicted RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 CPMP14384 443 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 CREB1P16220 341 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 PORP16435 677 aaPredicted RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 CSNK2A2P19784 350 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms