RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 MAD2L1Q13257 205 aaPredicted RBP9.92□□□□□ -0.82
TMEM260-206ENST00000555046 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 UGT3A2Q3SY77 523 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TCHHL1Q5QJ38 904 aaPredicted RBP9.92□□□□□ -0.82
TMEM260-206ENST00000555046 NDUFAF5Q5TEU4 345 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 C6orf163Q5TEZ5 329 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 CLEC6AQ6EIG7 209 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 SCIMPQ6UWF3 145 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 ISLR2Q6UXK2 745 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 ZCCHC23Q6ZST2 131 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 DDIASQ8IXT1 998 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 SLC5A8Q8N695 610 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 EXD3Q8N9H8 876 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TEX19Q8NA77 164 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 FDCSPQ8NFU4 85 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 OR14A16Q8NHC5 309 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 MGARPQ8TDB4 240 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TWIST2Q8WVJ9 160 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TSLPQ969D9 159 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 ARL8AQ96BM9 186 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TM4SF18Q96CE8 201 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 ZNF354BQ96LW1 612 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 HBEGFQ99075 208 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 SORBS1Q9BX66 1292 aaKnown RBP9.92□□□□□ -0.82
TMEM260-206ENST00000555046 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 LRTM1Q9HBL6 345 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 NECTIN3Q9NQS3 549 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 GIMAP4Q9NUV9 329 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 STMN3Q9NZ72 180 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 FIS1Q9Y3D6 152 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 PCDHA9Q9Y5H5 950 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 ZNF780BQ9Y6R6 833 aa9.92□□□□□ -0.82
TMEM260-206ENST00000555046 DYTNA2CJ06 578 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 SAGE2PA6NJ88 616 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 KLF11O14901 512 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 OR10H2O60403 315 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 DNAJB5O75953 348 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 SEC24DO94855 1032 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 LINC00032P0C843 101 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ALOX15P16050 662 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 CSNK2A2P19784 350 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 BGNP21810 368 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 TIA1P31483 386 aaKnown RBP eCLIP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ASMTP46597 345 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 STT3AP46977 705 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 XKP51811 444 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 HK2P52789 917 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 HNRNPH2P55795 449 aaKnown RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 SLC26A5P58743 744 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 CHAF1BQ13112 559 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 NR6A1Q15406 480 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 SMU1Q2TAY7 513 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ATP6AP1LQ52LC2 224 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ABHD17BQ5VST6 288 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 CPZQ66K79 652 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 C18orf63Q68DL7 685 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 NOXRED1Q6NXP6 359 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 IGFL3Q6UXB1 125 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ATG14Q6ZNE5 492 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 LANCL3Q6ZV70 420 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 IKBIPQ70UQ0 350 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 CLNKQ7Z7G1 428 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ST13P4Q8IZP2 240 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 FAM9CQ8IZT9 166 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 LGI4Q8N135 537 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ARFGAP2Q8N6H7 521 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 HORMAD2Q8N7B1 307 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 B3GNT7Q8NFL0 401 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 OR5L2Q8NGL0 311 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ANKRD9Q96BM1 317 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ZBTB9Q96C00 473 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 APIPQ96GX9 242 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 CSF3RQ99062 836 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ZNF552Q9H707 407 aaPredicted RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 KCNK13Q9HB14 408 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 EHD3Q9NZN3 535 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 COPS7AQ9UBW8 275 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 ZDHHC2Q9UIJ5 367 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 HAO1Q9UJM8 370 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 PPIEQ9UNP9 301 aaKnown RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 MAPRE3Q9UPY8 281 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
TMEM260-206ENST00000555046 MDC1Q14676 2089 aaKnown RBP9.91□□□□□ -0.82
TMEM260-206ENST00000555046 IGHV3-20A0A0C4DH32 117 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 TRPC5OSA6NMA1 111 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 A8MUA0 341 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 A8MUI8 341 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 C17orf105B2RV13 164 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 LDB3O75112 727 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 ZFAND5O76080 213 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 AIFM1O95831 613 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 CHN1P15882 459 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 PORP16435 677 aaPredicted RBP9.9□□□□□ -0.82
TMEM260-206ENST00000555046 MPIP34949 423 aa9.9□□□□□ -0.82
TMEM260-206ENST00000555046 RPL3P39023 403 aaKnown RBP9.9□□□□□ -0.82
TMEM260-206ENST00000555046 ALDH9A1P49189 494 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms