RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OR10G6Q8NH81 332 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 EXOSC8Q96B26 276 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 ZBED6CLQ96FA7 236 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 BARD1Q99728 777 aaKnown RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 ERVMER34-1Q9H9K5 563 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 LYRM4Q9HD34 91 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 THSD1Q9NS62 852 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 HRASLS2Q9NWW9 162 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 UCKL1Q9NWZ5 548 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 ZSCAN32Q9NX65 697 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 MUTYHQ9UIF7 546 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 FAF1Q9UNN5 650 aaPredicted RBP8.4□□□□□ -1.06
TDP1-210ENST00000554976 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 SLC22A7Q9Y694 548 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.06
TDP1-210ENST00000554976 B4DGG1 531 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 LMO7DNF2Z398 122 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 CYR61O00622 381 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 DEAF1O75398 565 aaPredicted RBP8.4□□□□□ -1.07
TDP1-210ENST00000554976 PIAS2O75928 621 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 UBXN7O94888 489 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 CST1P01037 141 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 IFI6P09912 130 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 UBTFL6P0CB48 400 aaPredicted RBP8.4□□□□□ -1.07
TDP1-210ENST00000554976 CTSEP14091 401 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 CXCL12P48061 93 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 CASP9P55211 416 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 DSTNP60981 165 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 BTN3A2P78410 334 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 MERTKQ12866 999 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 PRTGQ2VWP7 1150 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 RNF220Q5VTB9 566 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 NCCRP1Q6ZVX7 275 aaPredicted RBP8.4□□□□□ -1.07
TDP1-210ENST00000554976 WDR5BQ86VZ2 330 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 OOSP2Q86WS3 158 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 GKN2Q86XP6 184 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 ZDHHC21Q8IVQ6 265 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 SLC30A8Q8IWU4 369 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 NCLNQ969V3 563 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 PSD2Q9BQI7 771 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 DOHHQ9BU89 302 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 FAIM2Q9BWQ8 316 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 SEMA5BQ9P283 1151 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 DAPP1Q9UN19 280 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.07
TDP1-210ENST00000554976 A0A0J9YVX5 310 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 TRIM64CA6NLI5 447 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 AQP9O43315 295 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 NTRK1P04629 796 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SERPIND1P05546 499 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 GNAO1P09471 354 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 CRATP43155 626 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 ALDH9A1P49189 494 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 EPHA4P54764 986 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 ZXDAP98168 799 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 RGS1Q08116 209 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 DAG1Q14118 895 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 CLPPQ16740 277 aaPredicted RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 INAVAQ3KP66 663 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 FOXB2Q5VYV0 432 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 CEP68Q76N32 757 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 C6orf120Q7Z4R8 191 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 HS3ST5Q8IZT8 346 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 C19orf47Q8N9M1 422 aaKnown RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 FAM46DQ8NEK8 389 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 OR5K1Q8NHB7 308 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 FBLIM1Q8WUP2 373 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SLC38A5Q8WUX1 472 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 VPS50Q96JG6 964 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SPACA7Q96KW9 195 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 ROGDIQ9GZN7 287 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SMPD3Q9NY59 655 aaPredicted RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 FBXW2Q9UKT8 454 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 A0A1B0GTW7 788 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 GLOD5A6NK44 160 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 H0YAE9 185 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 GALR3O60755 368 aaPredicted RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 EPPINO95925 133 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 FABP3P05413 133 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SLC35G6P0C7Q6 338 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 DDX5P17844 614 aaKnown RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 MANFP55145 182 aaKnown RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 CDK6Q00534 326 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 HSPB3Q12988 150 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 GPR19Q15760 415 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 COMTD1Q86VU5 262 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 IQCF2Q8IXL9 164 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 CA13Q8N1Q1 262 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 AVL9Q8NBF6 648 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 CAMKVQ8NCB2 501 aa8.39□□□□□ -1.07
TDP1-210ENST00000554976 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
TDP1-210ENST00000554976 ZFP28Q8NHY6 868 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms