RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CASP6P55212 293 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 HERVK_113P63132 956 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 RNF4P78317 190 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 FOLH1Q04609 750 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 IFT88Q13099 833 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 SLC29A2Q14542 456 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 MPEG1Q2M385 716 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 SPRED3Q2MJR0 410 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 C18orf63Q68DL7 685 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 TTC19Q6DKK2 380 aaPredicted RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 Q6ZPB1 254 aaPredicted RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 PAGE2Q7Z2X7 111 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 MILR1Q7Z6M3 343 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 GHDCQ8N2G8 530 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZFP62Q8NB50 900 aaPredicted RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR4F6Q8NGB9 312 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 C16orf52Q8NHV5 167 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 NUBPLQ8TB37 319 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF721Q8TF20 911 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ASB15Q8WXK1 588 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 RBM18Q96H35 190 aaKnown RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 FBXL20Q96IG2 436 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 CDK15Q96Q40 435 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 RASL10BQ96S79 203 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ERVK-6Q9BXR3 956 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ELOVL6Q9H5J4 265 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 PPCSQ9HAB8 311 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 BRF2Q9HAW0 419 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 HPF1Q9NWY4 346 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 AHSPQ9NZD4 102 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 PSMC3IPQ9P2W1 217 aaPredicted RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 SUCOQ9UBS9 1254 aaKnown RBP9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRPS1Q9UHF7 1281 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF835Q9Y2P0 537 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 DNAJC13O75165 2243 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF407Q9C0G0 2248 aa9.66□□□□□ -0.86
PTCD2P1-201ENST00000554393 EXPH5Q8NEV8 1989 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SETD2Q9BYW2 2564 aaPredicted RBP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRGV8A0A0C4DH27 118 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 A0A1W2PR48 441 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 ASNA1O43681 348 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZG16O60844 167 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 AIFM1O95831 613 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 FAM153BP0C7A2 387 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 MEOX1P50221 254 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 NEK2P51955 445 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 ID2Q02363 134 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 FAM153CQ494X1 144 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 LINC01559Q495D7 138 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 HIST2H2BCQ6DN03 193 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR52E8Q6IFG1 317 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 OPN5Q6U736 354 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 RPTNQ6XPR3 784 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 RTL4Q6ZR62 310 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 MDGA2Q7Z553 956 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 FJX1Q86VR8 437 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SLC22A9Q8IVM8 553 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SULF2Q8IWU5 870 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 DND1Q8IYX4 353 aaKnown RBP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 CPSF7Q8N684 471 aaKnown RBP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 GOLM1Q8NBJ4 401 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 PSD4Q8NDX1 1056 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRPC4APQ8TEL6 797 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 MZB1Q8WU39 189 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SENP5Q96HI0 755 aaPredicted RBP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 MAGED4Q96JG8 741 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SGCZQ96LD1 299 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SEMA4BQ9NPR2 832 aaPredicted RBP9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 NMRK1Q9NWW6 199 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 TMEM216Q9P0N5 145 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 SNX6Q9UNH7 406 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 ERVK-11Q9UQG0 969 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 STK38LQ9Y2H1 464 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 CACNA1CQ13936 2221 aa9.65□□□□□ -0.86
PTCD2P1-201ENST00000554393 OTOGQ6ZRI0 2925 aa9.65□□□□□ -0.87
PTCD2P1-201ENST00000554393 ARHGAP10A1A4S6 786 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 OR6C76A6NM76 312 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 WWP2O00308 870 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 TFECO14948 347 aaPredicted RBP9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 PEX1O43933 1283 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 GUCY1B2O75343 617 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 OR6B1O95007 311 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 SLC35E2P0CK97 266 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 HSD3B1P14060 373 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 ATP5F1P24539 256 aaPredicted RBP9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 HSD3B2P26439 372 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 HSD17B3P37058 310 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 SOX3P41225 446 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 CDH13P55290 713 aa9.64□□□□□ -0.87
PTCD2P1-201ENST00000554393 CLCQ05315 142 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms