RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SLC44A1Q8WWI5 657 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PPWD1Q96BP3 646 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SARAFQ96BY9 339 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SDCCAG3Q96C92 435 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PHF21BQ96EK2 531 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 LRRC46Q96FV0 321 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 C16orf45Q96MC5 204 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 FRG2BQ96QU4 278 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CSF3RQ99062 836 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ELOVL6Q9H5J4 265 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 EXO5Q9H790 373 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 NOL11Q9H8H0 719 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 BRF2Q9HAW0 419 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PLSCR2Q9NRY7 297 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 QPCTLQ9NXS2 382 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 NINJ2Q9NZG7 142 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 B4GALT7Q9UBV7 327 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF223Q9UK11 482 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ACAD8Q9UKU7 415 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 BOKQ9UMX3 212 aaPredicted RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 STK38LQ9Y2H1 464 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 RNF11Q9Y3C5 154 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ATG4BQ9Y4P1 393 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 ASB1Q9Y576 335 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 PCDHGB3Q9Y5G1 929 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 CLDN16Q9Y5I7 305 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 NUP210LQ5VU65 1888 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SHANK1Q9Y566 2161 aa6.04□□□□□ -1.44
FOXN3-205ENST00000553904 SNRNP200O75643 2136 aaKnown RBP6.04□□□□□ -1.44
FOXN3-205ENST00000553904 A0A0A6YYD5 115 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 MYOCOSA0A1B0GUC4 107 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 A0A1B0GVC2 190 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 A0A1W2PR48 441 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ESYT3A0FGR9 886 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 C1orf226A1L170 272 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ANKRD33BA6NCL7 494 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TMEM200CA6NKL6 621 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NPIPA2E9PIF3 369 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NPIPA3F8WFD2 350 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 H3BQF6 201 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TGFBR3LH3BV60 316 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 FGF17O60258 216 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PRKNO60260 465 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 WDR1O75083 606 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 SNX4O95219 450 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ETHE1O95571 254 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ACSL3O95573 720 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 IGHG3P01860 377 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 KRT6AP02538 564 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ALDOAP04075 364 aaKnown RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 KRT6BP04259 564 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 IGKV3-11P04433 115 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NR2F6P10588 404 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PORP16435 677 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NAGAP17050 411 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TNFRSF8P28908 595 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PTGER1P34995 402 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 BSGP35613 385 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PEX19P40855 299 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 KRT6CP48668 564 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 XKP51811 444 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NEK2P51955 445 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 MAPK12P53778 367 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 NAA20P61599 178 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TRA2BP62995 288 aaKnown RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 KCNJ2P63252 427 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ADORA2A-AS1P86434 159 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 HSF1Q00613 529 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 IRF9Q00978 393 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ID2Q02363 134 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PMPCAQ10713 525 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF267Q14586 743 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ZNF791Q3KP31 576 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 GGTA1PQ4G0N0 100 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 CMPK2Q5EBM0 449 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TECRLQ5HYJ1 363 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 RNFT1Q5M7Z0 435 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TEX35Q5T0J7 233 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 C18orf63Q68DL7 685 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 OR52E8Q6IFG1 317 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 MRM1Q6IN84 353 aaKnown RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ADNP2Q6IQ32 1131 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 TRMT10CQ7L0Y3 403 aaKnown RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 CD163Q86VB7 1156 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PACS2Q86VP3 889 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 SLC22A9Q8IVM8 553 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 SAMD14Q8IZD0 417 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-205ENST00000553904 CLYBLQ8N0X4 340 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 LIX1Q8N485 282 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 FAM13CQ8NE31 585 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 OR7G1Q8NGA0 311 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 OR52N2Q8NGI0 321 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 OR5M3Q8NGP4 307 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 OR10Q1Q8NGQ4 319 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 LILRB4Q8NHJ6 448 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 WDR20Q8TBZ3 569 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 PAQR8Q8TEZ7 354 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 SELENOMQ8WWX9 145 aa6.03□□□□□ -1.44
FOXN3-205ENST00000553904 ISL2Q96A47 359 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms