RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SPACA9Q96E40 222 aaPredicted RBP21.29■■□□□ 1
SMARCD1-209ENST00000550477 CNPPD1Q9BV87 410 aa21.29■■□□□ 1
SMARCD1-209ENST00000550477 WDR41Q9HAD4 459 aa21.29■■□□□ 1
SMARCD1-209ENST00000550477 DNAJB12Q9NXW2 375 aaKnown RBP21.29■■□□□ 1
SMARCD1-209ENST00000550477 Q9UFV3 132 aa21.29■■□□□ 1
SMARCD1-209ENST00000550477 CAPN14A8MX76 684 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 SUPT3HB4E1H0 165 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 FGF17O60258 216 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 OR10H2O60403 315 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 SUPT3HO75486 399 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 PIAS1O75925 651 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 ALOX15P16050 662 aaPredicted RBP21.28■■□□□ 1
SMARCD1-209ENST00000550477 DNAJA1P31689 397 aaKnown RBP21.28■■□□□ 1
SMARCD1-209ENST00000550477 SF3B4Q15427 424 aaKnown RBP eCLIP21.28■■□□□ 11e-10■■■■□ 24.7
SMARCD1-209ENST00000550477 MAATS1Q7Z4T9 603 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 MYLK4Q86YV6 388 aaPredicted RBP21.28■■□□□ 1
SMARCD1-209ENST00000550477 ST13P4Q8IZP2 240 aaPredicted RBP21.28■■□□□ 1
SMARCD1-209ENST00000550477 TAGAPQ8N103 731 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 FAM13CQ8NE31 585 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 NINJ1Q92982 152 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 REPS1Q96D71 796 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 FBXL20Q96IG2 436 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 JSRP1Q96MG2 331 aaPredicted RBP21.28■■□□□ 1
SMARCD1-209ENST00000550477 ALG9Q9H6U8 611 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 PCDHGA11Q9Y5H2 935 aa21.28■■□□□ 1
SMARCD1-209ENST00000550477 SYCE1LA8MT33 242 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 CXorf49A8MYA2 514 aaPredicted RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 SAP18O00422 153 aaKnown RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 TP73O15350 636 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 NADKO95544 446 aaPredicted RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 IGKV3-11P04433 115 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 CELA3AP09093 270 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 CRABP2P29373 138 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 PIK3CBP42338 1070 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 PCDH1Q08174 1060 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 DDX39BQ13838 428 aaKnown RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 ZKSCAN8Q15776 578 aaPredicted RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 TBCELQ5QJ74 424 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 TMEM198Q66K66 360 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 RTL6Q6ICC9 239 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 GRHL2Q6ISB3 625 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 RNF111Q6ZNA4 994 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 PPWD1Q96BP3 646 aaKnown RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 GAL3ST4Q96RP7 486 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 POLDIP3Q9BY77 421 aaKnown RBP21.27■■□□□ 1
SMARCD1-209ENST00000550477 OR51B5Q9H339 312 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 ACKR4Q9NPB9 350 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 WHRNQ9P202 907 aa21.27■■□□□ 1
SMARCD1-209ENST00000550477 NINQ8N4C6 2090 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 TCRBV9S1A1TA0A576 114 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 FAM187AA6NFU0 413 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 OR6C76A6NM76 312 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 AHRRA9YTQ3 701 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 TP53I11O14683 189 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 ZNF354AO60765 605 aaPredicted RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 LTA4HP09960 611 aaKnown RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 PTX3P26022 381 aaPredicted RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 KIR2DL3P43628 341 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 TNFRSF17Q02223 184 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 ZNF267Q14586 743 aaPredicted RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 SLMAPQ14BN4 828 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 PRAMEF20Q5VT98 475 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 ISCA2Q86U28 154 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 C9orf40Q8IXQ3 194 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 ZCCHC7Q8N3Z6 543 aaKnown RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 NEIL3Q8TAT5 605 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 RIT1Q92963 219 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 DOHHQ9BU89 302 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 SEMA4BQ9NPR2 832 aaPredicted RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 IGSF5Q9NSI5 407 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 LYARQ9NX58 379 aaKnown RBP21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 L3MBTL1Q9Y468 752 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 CELSR1Q9NYQ6 3014 aa21.26■□□□□ 0.99
SMARCD1-209ENST00000550477 FAM159BA6NKW6 160 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 DVL2O14641 736 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 KERAO60938 352 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 GPR75O95800 540 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 CD99P14209 185 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 EPORP19235 508 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 IST1P53990 364 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 LIPJQ5W064 366 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 HLA-DQA1Q5Y7H0 255 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 CYP20A1Q6UW02 462 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 CCDC91Q7Z6B0 441 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 HUS1BQ8NHY5 278 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 UBTD2Q8WUN7 234 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 FOXC2Q99958 501 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 ERP44Q9BS26 406 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 DPH5Q9H2P9 285 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 ZNF703Q9H7S9 590 aaPredicted RBP21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 SH2D2AQ9NP31 389 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 TSC22D4Q9Y3Q8 395 aa21.25■□□□□ 0.99
SMARCD1-209ENST00000550477 CCDC189A1A4V9 331 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 FAM221AA4D161 298 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 FBXO45P0C2W1 286 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 UQCRC1P31930 480 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ADH7P40394 386 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 HERVK_113P63132 956 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ERVK-8P63133 956 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 PPP2R2AP63151 447 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms