RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CPZQ66K79 652 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 ANKRD26P1Q6NSI1 321 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 ZSCAN1Q8NBB4 408 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 OR7A2PQ8NGA2 310 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 PTPMT1Q8WUK0 201 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 EXOSC8Q96B26 276 aaKnown RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 CHMP6Q96FZ7 201 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 TMEM120AQ9BXJ8 343 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 TRIM55Q9BYV6 548 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 BRINP2Q9C0B6 783 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 PRORYQ9H606 182 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 REEP4Q9H6H4 257 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 SLAMF7Q9NQ25 335 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 TCF7L2Q9NQB0 619 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 PNO1Q9NRX1 252 aaKnown RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 EHD3Q9NZN3 535 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 ATP6V1HQ9UI12 483 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 FBXL4Q9UKA2 621 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 UTS2RQ9UKP6 389 aa12.2□□□□□ -0.46
RAB5C-206ENST00000550406 G3BP2Q9UN86 482 aaKnown RBP12.2□□□□□ -0.46
RAB5C-206ENST00000550406 LAMA5O15230 3695 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 A0A0G2JND7 137 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 MYO1GB0I1T2 1018 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 E9PBE3 544 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 PCDH17O14917 1159 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 SCAMP2O15127 329 aaKnown RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 KLHL41O60662 606 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ERAL1O75616 437 aaKnown RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CT62P0C5K7 136 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 SLC35E2P0CK97 266 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CPMP14384 443 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CD1EP15812 388 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 PTGER1P34995 402 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 FEN1P39748 380 aaKnown RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 STT3AP46977 705 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 NME5P56597 212 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 UFM1P61960 85 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CXADRP78310 365 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ACTN3Q08043 901 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 MGAT2Q10469 447 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 SERTAD2Q14140 314 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ST3GAL2Q16842 350 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 PAPD4Q6PIY7 484 aaKnown RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 C19orf48Q6RUI8 117 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ACAD11Q709F0 780 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 NDUFAF7Q7L592 441 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 SUN3Q8TAQ9 357 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 C10orf82Q8WW14 230 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 THAP4Q8WY91 577 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 KLHL29Q96CT2 875 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF764Q96H86 408 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CATSPER2Q96P56 530 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 IP6K3Q96PC2 410 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ADAP2Q9NPF8 381 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 SLC35C2Q9NQQ7 365 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 C19orf25Q9UFG5 118 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 POLHQ9Y253 713 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 KCNMB2Q9Y691 235 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 TNRC6AQ8NDV7 1962 aaKnown RBP12.19□□□□□ -0.46
RAB5C-206ENST00000550406 CPAMD8Q8IZJ3 1885 aa12.19□□□□□ -0.46
RAB5C-206ENST00000550406 ACACBO00763 2458 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 TPRP12270 2363 aaKnown RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 SAGE2PA6NJ88 616 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ARGFXA6NJG6 315 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 HRKO00198 91 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PEX12O00623 359 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 UBDO15205 165 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 DDAH2O95865 285 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 HPP00738 406 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 LAMP1P11279 417 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PORP16435 677 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 CSNK2A2P19784 350 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PRPS1L1P21108 318 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 FRKP42685 505 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 SLC26A5P58743 744 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PHC1P78364 1004 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 CHAF1BQ13112 559 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 BIKQ13323 160 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ST13P4Q8IZP2 240 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF321PQ8N8H1 164 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 CIDECQ96AQ7 238 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 COQ8BQ96D53 544 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 SIKE1Q9BRV8 207 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF385DQ9H6B1 395 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF160Q9HCG1 818 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 KLHL14Q9P2G3 628 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF223Q9UK11 482 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PSME2Q9UL46 239 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 PPIEQ9UNP9 301 aaKnown RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 MAN2B2Q9Y2E5 1009 aa12.18□□□□□ -0.46
RAB5C-206ENST00000550406 ANKRD11Q6UB99 2663 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-206ENST00000550406 NSG1A0A0A6YYJ2 146 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms