RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CCNG1P51959 295 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 IRF9Q00978 393 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FOLH1Q04609 750 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC10A1Q14973 349 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SPRED3Q2MJR0 410 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF750Q32MQ0 723 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FRG2Q64ET8 278 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FGD2Q7Z6J4 655 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 CD163Q86VB7 1156 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR4N5Q8IXE1 308 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SRRM1Q8IYB3 904 aaKnown RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 TAGAPQ8N103 731 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 C17orf53Q8N3J3 647 aaPredicted RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FAM109AQ8N4B1 249 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR52N2Q8NGI0 321 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 WDR20Q8TBZ3 569 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 RND1Q92730 232 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ISL2Q96A47 359 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SDCCAG3Q96C92 435 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SCYL1Q96KG9 808 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FRG2BQ96QU4 278 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 FMO2Q99518 471 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 MRPL57Q9BQC6 102 aaKnown RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 TTTY12Q9BZ98 90 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 NOL11Q9H8H0 719 aaKnown RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 LIN28AQ9H9Z2 209 aaKnown RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 DEPPQ9NTK1 212 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 CNIH4Q9P003 139 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 CPSF2Q9P2I0 782 aaKnown RBP10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ADAM29Q9UKF5 820 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ATG4BQ9Y4P1 393 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 ASB4Q9Y574 426 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 PCNX1Q96RV3 2341 aa10.07□□□□□ -0.8
VTI1BP3-201ENST00000550220 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 FIGNL2A6NMB9 653 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 FAM47E-STBD1D6RA91 191 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 SUSD5O60279 629 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 PDE9AO76083 593 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 IGHG3P01860 377 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CTAGE8P0CG41 777 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 PRF1P14222 555 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CAPN3P20807 821 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 ELAVL4P26378 380 aaKnown RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CHRNB4P30926 498 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 GMPRP36959 345 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 RFC3P40938 356 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 MAGEA12P43365 314 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 RPP38P78345 283 aaKnown RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 ID2Q02363 134 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 ASPHQ12797 758 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 IFT88Q13099 833 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 GGTA1PQ4G0N0 100 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 TECRLQ5HYJ1 363 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 C18orf63Q68DL7 685 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 TTC19Q6DKK2 380 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 RNF111Q6ZNA4 994 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 C16orf47Q6ZP98 133 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 MILR1Q7Z6M3 343 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 LCA5Q86VQ0 697 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CTAGE4Q8IX94 777 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 PTGR2Q8N8N7 351 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 MYRIPQ8NFW9 859 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 TP53INP1Q96A56 240 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 PPWD1Q96BP3 646 aaKnown RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 SARAFQ96BY9 339 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 SPACA9Q96E40 222 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CDC42EP4Q9H3Q1 356 aaKnown RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 QPCTLQ9NXS2 382 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 RNF11Q9Y3C5 154 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 CELSR2Q9HCU4 2923 aa10.06□□□□□ -0.8
VTI1BP3-201ENST00000550220 A0A087WUV0 522 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 MYOCOSA0A1B0GUC4 107 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 A0A1W2PR48 441 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ANKRD33BA6NCL7 494 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 FAM166BA8MTA8 275 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 FOXO6A8MYZ6 492 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 AQP7O14520 342 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 TP53I11O14683 189 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 HCN1O60741 890 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 SIX3O95343 332 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ACSL3O95573 720 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 OTCP00480 354 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 PIK3R1P27986 724 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 NEK2P51955 445 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 HNRNPH2P55795 449 aaKnown RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF267Q14586 743 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 ZNF791Q3KP31 576 aaPredicted RBP10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 GXYLT1Q4G148 440 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 C6orf163Q5TEZ5 329 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 HLA-DQA1Q5Y7H0 255 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 OR52E8Q6IFG1 317 aa10.05□□□□□ -0.8
VTI1BP3-201ENST00000550220 TRILQ7L0X0 811 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms