RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OR8K3Q8NH51 312 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 DNAJB8Q8NHS0 232 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 PRR7Q8TB68 274 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 METTL6Q8TCB7 284 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 AGAP11Q8TF27 550 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 FBXL20Q96IG2 436 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 APOPT1Q96IL0 206 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 IQCGQ9H095 443 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 TRIM45Q9H8W5 580 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 VPS29Q9UBQ0 182 aa16.03■□□□□ 0.16
CHMP1A-208ENST00000550102 DIDO1Q9BTC0 2240 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 H3BQF6 201 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 PRKNO60260 465 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 NME2P1O60361 137 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 ULK1O75385 1050 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 SP1P08047 785 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 CPA3P15088 417 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 NME2P22392 152 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 TDGF1P3P51864 188 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 NAGLUP54802 743 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 DNAJB13P59910 316 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 SLC18A2Q05940 514 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 TBL3Q12788 808 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 ERCC6LQ2NKX8 1250 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 NDUFAF5Q5TEU4 345 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 FAM219BQ5XKK7 198 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 CYP4Z2PQ8N1L4 340 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 MREGQ8N565 214 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 C1orf52Q8N6N3 182 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 GBP7Q8N8V2 638 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 RBM18Q96H35 190 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 MID1IP1Q9NPA3 183 aa16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 YARS2Q9Y2Z4 477 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-208ENST00000550102 EXPH5Q8NEV8 1989 aa16.02■□□□□ 0.15
CHMP1A-208ENST00000550102 OR2J2O76002 312 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 PIK3R1P27986 724 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 HTR6P50406 440 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 HK2P52789 917 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 RNF4P78317 190 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 MAPKAPK3Q16644 382 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 SPRED3Q2MJR0 410 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 LIPMQ5VYY2 423 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC25A25Q6KCM7 469 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 GALNTL5Q7Z4T8 443 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 TRABD2AQ86V40 505 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 GPALPP1Q8IXQ4 340 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 SRRM1Q8IYB3 904 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ZNF321PQ8N8H1 164 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 OR5L2Q8NGL0 311 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ZNF721Q8TF20 911 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ASB15Q8WXK1 588 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 FRMD6Q96NE9 622 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 CNPPD1Q9BV87 410 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ACPTQ9BZG2 426 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ROPN1BQ9BZX4 212 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 C12orf65Q9H3J6 166 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 ROPN1Q9HAT0 212 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 OXSMQ9NWU1 459 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 MYOTQ9UBF9 498 aa16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 KLF13Q9Y2Y9 288 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-208ENST00000550102 EML6Q6ZMW3 1958 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 TMEM200CA6NKL6 621 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 PGRMC2O15173 223 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 CRCPO75575 148 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 IGKV3-11P04433 115 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 GALNSP34059 522 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 SPIN4Q56A73 249 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 C16orf47Q6ZP98 133 aaPredicted RBP16■□□□□ 0.15
CHMP1A-208ENST00000550102 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
CHMP1A-208ENST00000550102 RIT1Q92963 219 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 PPWD1Q96BP3 646 aaKnown RBP16■□□□□ 0.15
CHMP1A-208ENST00000550102 SENP5Q96HI0 755 aaPredicted RBP16■□□□□ 0.15
CHMP1A-208ENST00000550102 KCNA7Q96RP8 456 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 PARD6BQ9BYG5 372 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 ERVK-11Q9UQG0 969 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 TIMM22Q9Y584 194 aa16■□□□□ 0.15
CHMP1A-208ENST00000550102 ASPDHA6ND91 283 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 A8MVJ9 347 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 WWP2O00308 870 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 UBFD1O14562 309 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 SEMA7AO75326 666 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC35E2P0CK97 266 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 MST1P26927 711 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ERVK-8P63133 956 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ACSM2AQ08AH3 577 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ASPHQ12797 758 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 PCLAFQ15004 111 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 C6orf163Q5TEZ5 329 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ACSM2BQ68CK6 577 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 RNF111Q6ZNA4 994 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 DGAT2L6Q6ZPD8 337 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ZNF227Q86WZ6 799 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 BANPQ8N9N5 519 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 OR4K14Q8NGD5 310 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 NUBPLQ8TB37 319 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 SSC4DQ8WTU2 575 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 RASL10BQ96S79 203 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 FAIM2Q9BWQ8 316 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 LIN28AQ9H9Z2 209 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms