RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 APOBEC4Q8WW27 367 aaKnown RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 PPCDCQ96CD2 204 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 CXorf40BQ96DE9 158 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 KATNB1Q9BVA0 655 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-228ENST00000548938 KLHL21Q9UJP4 597 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 STOML2Q9UJZ1 356 aa13.06□□□□□ -0.32
HDAC7-228ENST00000548938 H7C4K7 107 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 GPR37L1O60883 481 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 SLC16A8O95907 504 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ELAVL4P26378 380 aaKnown RBP13.05□□□□□ -0.32
HDAC7-228ENST00000548938 SLC9A3P48764 834 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-228ENST00000548938 CYP4F8P98187 520 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 LRRC74AQ0VAA2 488 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 USP45Q70EL2 814 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ANKRD33Q7Z3H0 272 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 DEFB128Q7Z7B8 93 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 TMPRSS11BQ86T26 416 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 LIX1LQ8IVB5 337 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 FAM109AQ8N4B1 249 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 LILRA3Q8N6C8 439 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-228ENST00000548938 OR8J1Q8NGP2 316 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ANGPTL6Q8NI99 470 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 WDR48Q8TAF3 677 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ANKRA2Q9H9E1 313 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 KPNA5O15131 536 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 SGTAO43765 313 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 CXCL10P02778 98 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 GALTP07902 379 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 PREPP48147 710 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 KCNC3Q14003 757 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 HEPACAMQ14CZ8 416 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ZNF628Q5EBL2 1059 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 HSDL2Q6YN16 418 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 PLCZ1Q86YW0 608 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 RASGRP3Q8IV61 690 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 MMP21Q8N119 569 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 OR2AP1Q8NGE2 309 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 OR52I1Q8NGK6 324 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 OR52P1PQ8NH57 321 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 NEIL2Q969S2 332 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ZBED6CLQ96FA7 236 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-228ENST00000548938 TVP23BQ9NYZ1 205 aa13.05□□□□□ -0.32
HDAC7-228ENST00000548938 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TLX2O43763 284 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 PRKYO43930 277 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 C1QBP02746 253 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 IFI30P13284 250 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 CPEP16870 476 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TNNI3P19429 210 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 IMPA1P29218 277 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 IRS1P35568 1242 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 CTSOP43234 321 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 GSTM5P46439 218 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 CSNK1DP48730 415 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SPINT3P49223 89 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 DSTNP60981 165 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 BNC1Q01954 994 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TLE2Q04725 743 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TNK1Q13470 666 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 NFE2L1Q14494 772 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 P2RY14Q15391 338 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MPPE1Q53F39 396 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 OR2G6Q5TZ20 316 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TMC8Q8IU68 726 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 RBM45Q8IUH3 476 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SIX5Q8N196 739 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 LMNTD1Q8N9Z9 388 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 GPR32P1Q8NGA4 272 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TM9SF4Q92544 642 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SCAMP4Q969E2 229 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 KCTD7Q96MP8 289 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TM9SF2Q99805 663 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 POLR2J3Q9H1A7 115 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 B3GAT2Q9NPZ5 323 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 NLKQ9UBE8 527 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 COMMD3Q9UBI1 195 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TUFMP49411 452 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TAS2R50P59544 299 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 PDE7AQ13946 482 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TAF12Q16514 161 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 DCST1Q5T197 706 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TRIQKQ629K1 86 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 DEF8Q6ZN54 512 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SLC38A6Q8IZM9 456 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms