RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OXTRP30559 389 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 LCN1P31025 176 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 CDKN1CP49918 316 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 AKR1D1P51857 326 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ARF5P84085 180 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 MAD2L1BPQ15013 274 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 PNCKQ6P2M8 343 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 RTL10Q7L3V2 364 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SERPINA11Q86U17 422 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 TP53INP2Q8IXH6 220 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 TCEAL8Q8IYN2 117 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 JAGN1Q8N5M9 183 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 RNF121Q9H920 327 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 IL17CQ9P0M4 197 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 HSFX1Q9UBD0 423 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 A6NHS1 94 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GPR37L1O60883 481 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 NDUFV2P19404 249 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GCAP28676 217 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 HSD17B12Q53GQ0 312 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GDPGP1Q6ZNW5 385 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ANKRD13BQ86YJ7 626 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF101Q8IZC7 436 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SPAG16Q8N0X2 631 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SPERTQ8NA61 448 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 PTGES2Q9H7Z7 377 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 EVA1AQ9H8M9 152 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 C14orf166Q9Y224 244 aaKnown RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 JRKO75564 520 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 RPL19P84098 196 aaKnown RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 GBX1Q14549 363 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CES4AQ5XG92 561 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 APCDD1Q8J025 514 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CPXM2Q8N436 756 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 THAP4Q8WY91 577 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 KCNN1Q92952 543 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 NTMT1Q9BV86 223 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 RANBP3Q9H6Z4 567 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 GORASP2Q9H8Y8 452 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 HEBP1Q9NRV9 189 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ENPP4Q9Y6X5 453 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 LOC285095A0A1B0GVY8 99 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 BLOC1S5-TXNDC5H3BN57 136 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 L7N2F9 121 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 KIAA0513O60268 411 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 RNGTTO60942 597 aaKnown RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 C6P13671 934 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 C5AR1P21730 350 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 MAP2K3P46734 347 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ARRB1P49407 418 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 HK3P52790 923 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 DHCR24Q15392 516 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 RGNQ15493 299 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PROX2Q3B8N5 592 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 TBC1D25Q3MII6 688 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 SNX29P2Q8IUI4 249 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ECHDC3Q96DC8 303 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CLDND1Q9NY35 253 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 EMCNQ9ULC0 261 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 TTC34A8MYJ7 566 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PRH1P02810 166 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 POLR2CP19387 275 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PVALBP20472 110 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CAPZA1P52907 286 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CATSPEREQ5SY80 951 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 TIGD4Q8IY51 512 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 LMX1AQ8TE12 382 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 NELL2Q99435 816 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 HRASLS2Q9NWW9 162 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ALG5Q9Y673 324 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CLCA1A8K7I4 914 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 OSMP13725 252 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 UGT2B10P36537 528 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 MAGEA2P43356 314 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 NFATC3Q12968 1075 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 MICAQ29983 383 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF615Q8N8J6 731 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 NSMAFQ92636 917 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 SMARCD2Q92925 531 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CHFRQ96EP1 664 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CCDC115Q96NT0 180 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 OR2B2Q9GZK3 357 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 SARDHQ9UL12 918 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PTTG1O95997 202 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 STATHP02808 62 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF267Q14586 743 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 MPP7Q5T2T1 576 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 LCTLQ6UWM7 567 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 TRIM73Q86UV7 250 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF597Q96LX8 424 aa11.97□□□□□ -0.49
COL4A6-209ENST00000545689 CPEB1Q9BZB8 566 aaKnown RBP11.97□□□□□ -0.49
COL4A6-209ENST00000545689 IL23AQ9NPF7 189 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms