RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MSL3P1P0C860 447 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 C1GALT1C1LP0DN25 315 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 GAAP10253 952 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CTSAP10619 480 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CHRNB1P11230 501 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 PPP3R1P63098 170 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 SLC7A9P82251 487 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 GALK2Q01415 458 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 MC1RQ01726 317 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 C19orf57Q0VDD7 668 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 SEC23BQ15437 767 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 PLK5Q496M5 336 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 KLHL22Q53GT1 634 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ZNF628Q5EBL2 1059 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CST9Q5W186 159 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TCTN3Q6NUS6 607 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 CEACAM20Q6UY09 585 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 PLCZ1Q86YW0 608 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TCEANCQ8N8B7 351 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 OR52I1Q8NGK6 324 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 WDR48Q8TAF3 677 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 JPH3Q8WXH2 748 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 TTC9Q92623 222 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 ZNF334Q9HCZ1 680 aaPredicted RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 MIEF1Q9NQG6 463 aa8.32□□□□□ -1.08
TDP1-204ENST00000545686 MRPS18AQ9NVS2 196 aaKnown RBP8.32□□□□□ -1.08
TDP1-204ENST00000545686 A0A0B4J293 547 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SOX14O95416 240 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ACADMP11310 421 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 NPPBP16860 134 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 MYL12AP19105 171 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SDC2P34741 201 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PREPP48147 710 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 WNT4P56705 351 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PRKCZQ05513 592 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TPBGQ13641 420 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 RIN1Q13671 783 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 QSOX2Q6ZRP7 698 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 USP30Q70CQ3 517 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 HSD11B1LQ7Z5J1 315 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TCEAL8Q8IYN2 117 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PLA2G15Q8NCC3 412 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 GPR32P1Q8NGA4 272 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ANGPTL6Q8NI99 470 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SLC38A5Q8WUX1 472 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF480Q8WV37 535 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 OR5P2Q8WZ92 322 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SCAMP4Q969E2 229 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 RNF31Q96EP0 1072 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 IGSF21Q96ID5 467 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF354BQ96LW1 612 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 CXorf36Q9H7Y0 433 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 FGF20Q9NP95 211 aaPredicted RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 RPRD1BQ9NQG5 326 aaKnown RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 DIABLOQ9NR28 239 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZSCAN32Q9NX65 697 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TAAR2Q9P1P5 351 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 CFAP97Q9P2B7 532 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 NUFIP1Q9UHK0 495 aaKnown RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 INSL5Q9Y5Q6 135 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TSPAN11A1L157 253 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SNTNA6NMZ2 147 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SLC30A4O14863 429 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PLD2O14939 933 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 NDUFB5O43674 189 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 BNIP3LO60238 219 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 C1orf105O95561 183 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SOD2P04179 222 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 BCHEP06276 602 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 IL3P08700 152 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SLC10A3P09131 477 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 NR2F6P10588 404 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 FGF9P31371 208 aaPredicted RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 FEN1P39748 380 aaKnown RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 KIR2DL3P43628 341 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 MAP2K3P46734 347 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 KCNJ5P48544 419 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 RAB40BQ12829 278 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 TNK1Q13470 666 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 RAB33AQ14088 237 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 GPNMBQ14956 572 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF284Q2VY69 593 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PYDC2Q56P42 97 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SYT14P1Q58G82 188 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SNAP47Q5SQN1 464 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PLET1Q6UQ28 207 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 RASGEF1AQ8N9B8 481 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SLC5A11Q8WWX8 675 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF764Q96H86 408 aaPredicted RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 TMEM19Q96HH6 336 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms