RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 NECTIN3Q9NQS3 549 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 AGPAT4Q9NRZ5 378 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MS4A12Q9NXJ0 267 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 AHSPQ9NZD4 102 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 TMEM216Q9P0N5 145 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SUCOQ9UBS9 1254 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 FBXW2Q9UKT8 454 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 PLAAQ9Y263 795 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 STK38LQ9Y2H1 464 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RNF11Q9Y3C5 154 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 COPG1Q9Y678 874 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CNTRLQ7Z7A1 2325 aa6.9□□□□□ -1.31
CPSF7-224ENST00000544990 KALRNO60229 2985 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 IGKV3D-11A0A0A0MRZ8 115 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 TRAV17A0A0B4J275 112 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 A0A1W2PPM1 405 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SAGE2PA6NJ88 616 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SMIM23A6NLE4 172 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 A8MUA0 341 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SAP18O00422 153 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 RTCAO00442 366 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CYR61O00622 381 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 PLPP1O14494 284 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 OR7A17O14581 309 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SCELO95171 688 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 MLYCDO95822 493 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 WDPCPO95876 746 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SHBGP04278 402 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 IFNA16P05015 189 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SBK3P0C264 359 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 TNNI3P19429 210 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 IMPDH1P20839 514 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ATP5F1P24539 256 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 PPP2R1BP30154 601 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 HSD17B3P37058 310 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 GATA4P43694 442 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SLCO1A2P46721 670 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CLCN2P51788 898 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 NEK2P51955 445 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CDH13P55290 713 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 NAA20P61599 178 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 VSNL1P62760 191 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 IFFO1Q0D2I5 559 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SLAMF1Q13291 335 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SERTAD2Q14140 314 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 TERF2Q15554 542 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CCDC153Q494R4 210 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 GGTA1PQ4G0N0 100 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ACER2Q5QJU3 275 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ZNF678Q5SXM1 525 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 FRG2Q64ET8 278 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 RPUSD3Q6P087 351 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 WDR93Q6P2C0 686 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 EMBQ6PCB8 327 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CYP20A1Q6UW02 462 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ZNF793Q6ZN11 406 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CUZD1Q86UP6 607 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 GPR180Q86V85 440 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 RPS19BP1Q86WX3 136 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SCUBE1Q8IWY4 988 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ZCCHC7Q8N3Z6 543 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 RIBC1Q8N443 379 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 RNF175Q8N4F7 328 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 TMEM151AQ8N4L1 468 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CISD2Q8N5K1 135 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 FAM47BQ8NA70 645 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CATSPER1Q8NEC5 780 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 B3GNT7Q8NFL0 401 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 OR4F6Q8NGB9 312 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 OR1N1Q8NGS0 311 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ELP5Q8TE02 316 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 MZB1Q8WU39 189 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 DAZLQ92904 295 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SNRNP40Q96DI7 357 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 MTFMTQ96DP5 389 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 FRG2BQ96QU4 278 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 MAPKAP1Q9BPZ7 522 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 DEFB126Q9BYW3 111 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ELOVL6Q9H5J4 265 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 WDR41Q9HAD4 459 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 ADAP2Q9NPF8 381 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 PNO1Q9NRX1 252 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 NMRK1Q9NWW6 199 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 LYARQ9NX58 379 aaKnown RBP6.89□□□□□ -1.31
CPSF7-224ENST00000544990 PLA2G3Q9NZ20 509 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 PHF11Q9UIL8 331 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 GRID1Q9ULK0 1009 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 SNX6Q9UNH7 406 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CSAG2Q9Y5P2 127 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 CLCA3PQ9Y6N3 262 aa6.89□□□□□ -1.31
CPSF7-224ENST00000544990 NAV2Q8IVL1 2488 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CCDC151A5D8V7 595 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 OR5H15A6NDH6 313 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 FCHO1O14526 889 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 COPEO14579 308 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms