RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 SNRNP27Q8WVK2 155 aaKnown RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 UBLCP1Q8WVY7 318 aaPredicted RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 DNASE1L2Q92874 299 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 ERP27Q96DN0 273 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 RAB3CQ96E17 227 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 GBP5Q96PP8 586 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 RAB40CQ96S21 281 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 TTYH2Q9BSA4 534 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 CUEDC2Q9H467 287 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 NFKBIL1Q9UBC1 381 aaPredicted RBP2.31□□□□□ -2.04
CCDC170-203ENST00000544131 MLXQ9UH92 298 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
CCDC170-203ENST00000544131 TMEM129A0AVI4 362 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GTPBP10A4D1E9 387 aaKnown RBP2.3□□□□□ -2.04
CCDC170-203ENST00000544131 YDJCA8MPS7 323 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 K7ERI5 159 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GPAA1O43292 621 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 SYT7O43581 403 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 TIMM44O43615 452 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 APBB3O95704 486 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GSTA2P09210 222 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 SLC35E2P0CK97 266 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GLRA1P23415 457 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 MTIF2P46199 727 aaKnown RBP2.3□□□□□ -2.04
CCDC170-203ENST00000544131 IER3P46695 156 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 TWISTNBQ3B726 338 aaPredicted RBP2.3□□□□□ -2.04
CCDC170-203ENST00000544131 DCAF12Q5T6F0 453 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 FAM219BQ5XKK7 198 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 IGFL2Q6UWQ7 119 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 IGFL3Q6UXB1 125 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 OTOAQ7RTW8 1153 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GVQW1Q8N7I0 195 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 LINC01006Q8NI28 216 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 SPATA18Q8TC71 538 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 PRCCQ92733 491 aaPredicted RBP2.3□□□□□ -2.04
CCDC170-203ENST00000544131 SEC14L4Q9UDX3 406 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 CFDP1Q9UEE9 299 aaPredicted RBP2.3□□□□□ -2.04
CCDC170-203ENST00000544131 GPR132Q9UNW8 380 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 ACEP12821 1306 aa2.3□□□□□ -2.04
CCDC170-203ENST00000544131 TRAV34A0A0B4J273 112 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 ATP6AP2A0A1C7CYW4 349 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 MAGEB16A2A368 324 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 TRABD2BA6NFA1 517 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 FRG2CA6NGY1 282 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 EPOPA6NHQ4 379 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CSDE1O75534 798 aaKnown RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF32P17041 273 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 OR1D2P34982 312 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 KCNJ1P48048 391 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CCR4P51679 360 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 ARHGDIAP52565 204 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SLC10A1Q14973 349 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SPHARQ15513 63 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 UNC50Q53HI1 259 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CAVIN1Q6NZI2 390 aaKnown RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 PODNL1Q6PEZ8 512 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 C2orf66Q6UXQ4 117 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 GCNT7Q6ZNI0 430 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 WDR49Q8IV35 697 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 KLHL7Q8IXQ5 586 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CHDHQ8NE62 594 aaPredicted RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 OR2L5Q8NG80 312 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 OR4F5Q8NH21 305 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF564Q8TBZ8 553 aaPredicted RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 PNPLA2Q96AD5 504 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 FAF2Q96CS3 445 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SNRNP40Q96DI7 357 aaKnown RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CASD1Q96PB1 797 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 OR5M11Q96RB7 305 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 RASL10BQ96S79 203 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SERINC2Q96SA4 455 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 BAG1Q99933 345 aaPredicted RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 CXXC4Q9H2H0 198 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 IKZF5Q9H5V7 419 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 TIGARQ9NQ88 270 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 IMPAD1Q9NX62 359 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SLCO1C1Q9NYB5 712 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 SENP1Q9P0U3 644 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 PRODH2Q9UF12 536 aa2.29□□□□□ -2.04
CCDC170-203ENST00000544131 MTF2Q9Y483 593 aaPredicted RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 RAI1Q7Z5J4 1906 aaPredicted RBP2.29□□□□□ -2.04
CCDC170-203ENST00000544131 IGHV3-35A0A0C4DH35 117 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 SLC15A5A6NIM6 579 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 CHUKO15111 745 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 DKC1O60832 514 aaKnown RBP eCLIP2.28□□□□□ -2.04
CCDC170-203ENST00000544131 RAD51DO75771 328 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 PROS1P07225 676 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 SBK2P0C263 348 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 GP5P40197 560 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 MFAP2P55001 183 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 UCNP55089 124 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 ACKR1Q16570 336 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 WSCD2Q2TBF2 565 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 PAN3Q58A45 887 aaKnown RBP2.28□□□□□ -2.04
CCDC170-203ENST00000544131 ACER2Q5QJU3 275 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 SHQ1Q6PI26 577 aaKnown RBP2.28□□□□□ -2.04
CCDC170-203ENST00000544131 CYP4V2Q6ZWL3 525 aaPredicted RBP2.28□□□□□ -2.04
CCDC170-203ENST00000544131 PIWIL1Q96J94 861 aaKnown RBP2.28□□□□□ -2.04
CCDC170-203ENST00000544131 ZNF559Q9BR84 538 aa2.28□□□□□ -2.04
CCDC170-203ENST00000544131 AP1M1Q9BXS5 423 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms