RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ICE1Q9Y2F5 2266 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 UTP20O75691 2785 aaKnown RBP21.6■■□□□ 1.05
CHFR-222ENST00000544093 A0A1B0GTL3 188 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 A0A1W2PPM1 405 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 TMEM200CA6NKL6 621 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 ULK1O75385 1050 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 OR4F21O95013 312 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 KLK1P06870 262 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 SLC35E2P0CK97 266 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 TSPAN8P19075 237 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 PIK3R1P27986 724 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 CRHR1P34998 444 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 SLCO1A2P46721 670 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 ST13P50502 369 aaKnown RBP21.6■■□□□ 1.05
CHFR-222ENST00000544093 MAPK12P53778 367 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 ZYG11AQ6WRX3 759 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 SH2D5Q6ZV89 423 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.6■■□□□ 1.05
CHFR-222ENST00000544093 CDYL2Q8N8U2 506 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 GBP7Q8N8V2 638 aaPredicted RBP21.6■■□□□ 1.05
CHFR-222ENST00000544093 METTL6Q8TCB7 284 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 VPS29Q9UBQ0 182 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 ZNF225Q9UK10 706 aa21.6■■□□□ 1.05
CHFR-222ENST00000544093 MYOCOSA0A1B0GUC4 107 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 PRKNO60260 465 aaPredicted RBP21.59■■□□□ 1.05
CHFR-222ENST00000544093 ZNF500O60304 480 aaPredicted RBP21.59■■□□□ 1.05
CHFR-222ENST00000544093 GBAP04062 536 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 IGKV3-11P04433 115 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 ZNF24P17028 368 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 HMOX2P30519 316 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 HK2P52789 917 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 KCNK10P57789 538 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 MPEG1Q2M385 716 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 NDUFAF5Q5TEU4 345 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 OPN5Q6U736 354 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 COMMD6Q7Z4G1 85 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 RIBC1Q8N443 379 aaPredicted RBP21.59■■□□□ 1.05
CHFR-222ENST00000544093 RIT1Q92963 219 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 GPR137Q96N19 417 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 RASL10BQ96S79 203 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 FARSBQ9NSD9 589 aaKnown RBP21.59■■□□□ 1.05
CHFR-222ENST00000544093 MID2Q9UJV3 735 aa21.59■■□□□ 1.05
CHFR-222ENST00000544093 DIDO1Q9BTC0 2240 aaKnown RBP21.59■■□□□ 1.05
CHFR-222ENST00000544093 GLOD5A6NK44 160 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 WWP2O00308 870 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 MANBAO00462 879 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 COPEO14579 308 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 LRRTM2O43300 516 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 PRKRAO75569 313 aaKnown RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 ESRRBO95718 433 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 NUDT17P0C025 328 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 CASP6P55212 293 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 TRA2BP62995 288 aaKnown RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 EMBQ6PCB8 327 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 BNC2Q6ZN30 1099 aaPredicted RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 OR4K14Q8NGD5 310 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 EPS8L3Q8TE67 593 aaKnown RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 RELTQ969Z4 430 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 PPWD1Q96BP3 646 aaKnown RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 SGCZQ96LD1 299 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 TEX10Q9NXF1 929 aaPredicted RBP21.58■■□□□ 1.05
CHFR-222ENST00000544093 EMCNQ9ULC0 261 aa21.58■■□□□ 1.05
CHFR-222ENST00000544093 C1orf226A1L170 272 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 SMIM23A6NLE4 172 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 OR6C76A6NM76 312 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 G3V2L1 256 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 SLU7O95391 586 aaKnown RBP21.57■■□□□ 1.04
CHFR-222ENST00000544093 PROCP04070 461 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 KRT4P19013 534 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 GALNT1Q10472 559 aaPredicted RBP21.57■■□□□ 1.04
CHFR-222ENST00000544093 TBL3Q12788 808 aaKnown RBP21.57■■□□□ 1.04
CHFR-222ENST00000544093 WDR93Q6P2C0 686 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 SLC29A4Q7RTT9 530 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 DND1Q8IYX4 353 aaKnown RBP21.57■■□□□ 1.04
CHFR-222ENST00000544093 SLC15A4Q8N697 577 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 ZNF321PQ8N8H1 164 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 GOLM1Q8NBJ4 401 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 SLC22A8Q8TCC7 542 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 CNPPD1Q9BV87 410 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 FAIM2Q9BWQ8 316 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 PSME2Q9UL46 239 aa21.57■■□□□ 1.04
CHFR-222ENST00000544093 GOLGA6L10A6NI86 522 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 PLIN3O60664 434 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 SOX3P41225 446 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 DNAJB13P59910 316 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 VSNL1P62760 191 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 SPIN4Q56A73 249 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 CFAP157Q5JU67 520 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 C6orf163Q5TEZ5 329 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 MTFR2Q6P444 385 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 IL20RBQ6UXL0 311 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 RNF111Q6ZNA4 994 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 RTL4Q6ZR62 310 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 SIAH3Q8IW03 269 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 SULF2Q8IWU5 870 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 HOMEZQ8IX15 550 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 CPSF7Q8N684 471 aaKnown RBP21.56■■□□□ 1.04
CHFR-222ENST00000544093 CCNYL1Q8N7R7 359 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 PSD4Q8NDX1 1056 aa21.56■■□□□ 1.04
CHFR-222ENST00000544093 GSTO2Q9H4Y5 243 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms