RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 APLFQ8IW19 511 aaPredicted RBP11.41□□□□□ -0.58
DDX55-210ENST00000543016 OR14A16Q8NHC5 309 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 TSLPQ969D9 159 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 PPCDCQ96CD2 204 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 KLHL29Q96CT2 875 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 ERP27Q96DN0 273 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 ART5Q96L15 291 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 DGAT2Q96PD7 388 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 OR52B2Q96RD2 323 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 DPY30Q9C005 99 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 BRINP2Q9C0B6 783 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 RABEP2Q9H5N1 569 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 ZIM2Q9NZV7 527 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 HEY2Q9UBP5 337 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 GIMAP2Q9UG22 337 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 BAIAP2L1Q9UHR4 511 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 PPIEQ9UNP9 301 aaKnown RBP11.41□□□□□ -0.58
DDX55-210ENST00000543016 ENTPD4Q9Y227 616 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 CLCA3PQ9Y6N3 262 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 PTPRQQ9UMZ3 2332 aa11.41□□□□□ -0.58
DDX55-210ENST00000543016 IGHV1-45A0A0A0MS14 117 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 A0A0G2JND7 137 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 GLOD5A6NK44 160 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 SCAMP2O15127 329 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 OR10H2O60403 315 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 IFNA16P05015 189 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ATP1B1P05026 303 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 COX6A1P12074 109 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 TNNI3P19429 210 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ITPKBP27987 946 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 NTSP30990 170 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ATP4BP51164 291 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 DIO3P55073 304 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 SOX8P57073 446 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 STX1BP61266 288 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 SRSF11Q05519 484 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 LRRC74AQ0VAA2 488 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 SRSF6Q13247 344 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 PTGR1Q14914 329 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 SPRED3Q2MJR0 410 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 DCAF10Q5QP82 559 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 CPTPQ5TA50 214 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 C6orf163Q5TEZ5 329 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 PLAG1Q6DJT9 500 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 JMJD6Q6NYC1 403 aaPredicted RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 PAPD4Q6PIY7 484 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 TICAM1Q8IUC6 712 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 TMEM151BQ8IW70 566 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 RIMKLAQ8IXN7 391 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 LRRC25Q8N386 305 aaPredicted RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 CLEC1AQ8NC01 280 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 MORN4Q8NDC4 146 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ZFP28Q8NHY6 868 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 CDC26Q8NHZ8 85 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 M1APQ8TC57 530 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 TESCQ96BS2 214 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 COQ8BQ96D53 544 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 EGLN2Q96KS0 407 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 IMMP1LQ96LU5 166 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ZNF681Q96N22 645 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 RILPQ96NA2 401 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 ZBTB18Q99592 522 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 KCNK13Q9HB14 408 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 SDR39U1Q9NRG7 319 aaPredicted RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 ACSS1Q9NUB1 689 aaPredicted RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX55-210ENST00000543016 FBXL4Q9UKA2 621 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 EXO1Q9UQ84 846 aaKnown RBP11.4□□□□□ -0.58
DDX55-210ENST00000543016 MAN2B2Q9Y2E5 1009 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 GPR45Q9Y5Y3 372 aa11.4□□□□□ -0.58
DDX55-210ENST00000543016 NUP210LQ5VU65 1888 aa11.4□□□□□ -0.59
DDX55-210ENST00000543016 OR2W5A6NFC9 320 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 SAGE2PA6NJ88 616 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 GABRR3A8MPY1 467 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 MYO1GB0I1T2 1018 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 CDK2AP1O14519 115 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 ANKRD28O15084 1053 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 PRKRAO75569 313 aaKnown RBP11.39□□□□□ -0.59
DDX55-210ENST00000543016 ERAL1O75616 437 aaKnown RBP11.39□□□□□ -0.59
DDX55-210ENST00000543016 BCAS2O75934 225 aaPredicted RBP11.39□□□□□ -0.59
DDX55-210ENST00000543016 SERPINA7P05543 415 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 ALDOCP09972 364 aaKnown RBP11.39□□□□□ -0.59
DDX55-210ENST00000543016 PRKAR1AP10644 381 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 EFNA3P52797 238 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 FOXL2P58012 376 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 ATP1A4Q13733 1029 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 MLC1Q15049 377 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 PCOLCEQ15113 449 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 IRAK1BP1Q5VVH5 260 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 FAAH2Q6GMR7 532 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 LANCL3Q6ZV70 420 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 CPLX4Q7Z7G2 160 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 OR4N5Q8IXE1 308 aa11.39□□□□□ -0.59
DDX55-210ENST00000543016 KBTBD2Q8IY47 623 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms