RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 C17orf62Q9BQA9 187 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 KLHL31Q9H511 634 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 ZBTB20Q9HC78 741 aaPredicted RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 MYNNQ9NPC7 610 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 DDX28Q9NUL7 540 aaKnown RBP14.04□□□□□ -0.16
DDX55-209ENST00000542286 ZNF221Q9UK13 617 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 PADI2Q9Y2J8 665 aa14.04□□□□□ -0.16
DDX55-209ENST00000542286 FFAR1O14842 300 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 NFATC1O95644 943 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 CD72P21854 359 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 PBX2P40425 430 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 MANFP55145 182 aaKnown RBP14.03□□□□□ -0.16
DDX55-209ENST00000542286 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
DDX55-209ENST00000542286 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 PSRC1Q6PGN9 363 aaPredicted RBP14.03□□□□□ -0.16
DDX55-209ENST00000542286 P3H2Q8IVL5 708 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 SHISA5Q8N114 240 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 CELF2-AS1Q8N7Q2 184 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 SMARCD2Q92925 531 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 TM4SF18Q96CE8 201 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 COPS4Q9BT78 406 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 AICDAQ9GZX7 198 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 TRBV4-1A0A0J9YWV2 114 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 AGAP5A6NIR3 686 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 C4orf51C9J302 202 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 PI15O43692 258 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 NTN1O95631 604 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 GASTP01350 101 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 HSMCR30P0CW71 290 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 C8orf89P0DMQ9 161 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 CD36P16671 472 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 JUNDP17535 347 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 GJA4P35212 333 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 PRKAG1P54619 331 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 CHRNEQ04844 493 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 IL18R1Q13478 541 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 MLF2Q15773 248 aaPredicted RBP14.03□□□□□ -0.16
DDX55-209ENST00000542286 ZNF404Q494X3 552 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 VITQ6UXI7 678 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 GDPD3Q7L5L3 318 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 C11orf74Q86VG3 221 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 CPA6Q8N4T0 437 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 OR4D11Q8NGI4 311 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 OR4C15Q8NGM1 316 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 ZNF566Q969W8 418 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 WDR34Q96EX3 536 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 EPYCQ99645 322 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 PRR14Q9BWN1 585 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 C6orf62Q9GZU0 229 aaPredicted RBP14.03□□□□□ -0.16
DDX55-209ENST00000542286 EPHX3Q9H6B9 360 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 KCNK12Q9HB15 430 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 ZNF226Q9NYT6 803 aa14.03□□□□□ -0.16
DDX55-209ENST00000542286 A0A1W2PPV9 198 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 CARNS1A5YM72 827 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 EFCAB9A8MZ26 197 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 ALX3O95076 343 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 MRPS15P82914 257 aaKnown RBP14.02□□□□□ -0.16
DDX55-209ENST00000542286 GPM6BQ13491 265 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 AGAP6Q5VW22 663 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 KHDRBS2Q5VWX1 349 aaKnown RBP14.02□□□□□ -0.16
DDX55-209ENST00000542286 GATAD2AQ86YP4 633 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 SIX5Q8N196 739 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 AQP11Q8NBQ7 271 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 IL17RDQ8NFM7 739 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 HRASLS5Q96KN8 279 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 C12orf66Q96MD2 445 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 AGAP4Q96P64 663 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 IL4I1Q96RQ9 567 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 SERHL2Q9H4I8 314 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 C11orf16Q9NQ32 467 aa14.02□□□□□ -0.16
DDX55-209ENST00000542286 TRBV23OR9-2A0A075B6M9 112 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 IGKV1-8A0A0C4DH67 115 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 ALOX12P18054 663 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 PTNP21246 168 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 BSGP35613 385 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 DSTNP60981 165 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 ZNF33BQ06732 778 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 DPTQ07507 201 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 PCDH1Q08174 1060 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 TEAD4Q15561 434 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 SPDYE7PQ495Y7 208 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 C2orf27AQ580R0 203 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 LRRTM4Q86VH4 590 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 DCUN1D3Q8IWE4 304 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 OR6F1Q8NGZ6 308 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 GOT1L1Q8NHS2 421 aaPredicted RBP14.02□□□□□ -0.17
DDX55-209ENST00000542286 DOK4Q8TEW6 326 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 CHAC2Q8WUX2 184 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 GGHQ92820 318 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 TMEM19Q96HH6 336 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 PPP1R16AQ96I34 528 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 FCRL4Q96PJ5 515 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 INSM2Q96T92 566 aaPredicted RBP14.02□□□□□ -0.17
DDX55-209ENST00000542286 MENTQ9BUN1 341 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.17
DDX55-209ENST00000542286 DCSTAMPQ9H295 470 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms