RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 OR4N5Q8IXE1 308 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 OR4K14Q8NGD5 310 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 PGM2Q96G03 612 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 FBXL20Q96IG2 436 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 METTL2AQ96IZ6 378 aaKnown RBP12.47□□□□□ -0.41
CCDC130-202ENST00000540216 SHCBP1LQ9BZQ2 653 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 STMN4Q9H169 189 aaPredicted RBP12.47□□□□□ -0.41
CCDC130-202ENST00000540216 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
CCDC130-202ENST00000540216 EML4Q9HC35 981 aaKnown RBP12.47□□□□□ -0.41
CCDC130-202ENST00000540216 ASF1BQ9NVP2 202 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
CCDC130-202ENST00000540216 BSNQ9UPA5 3926 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 GNG14A0A1W2PPG7 69 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 TM9SF1O15321 606 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 PCDH7O60245 1069 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 CHEK2O96017 543 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 F10P00742 488 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 CD46P15529 392 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 CHN1P15882 459 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 TIA1P31483 386 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 CYB561P49447 251 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 FOXA1P55317 472 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 OC90Q02509 493 aaPredicted RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 IMPG1Q17R60 797 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 TNFAIP8L3Q5GJ75 292 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 ZNF766Q5HY98 468 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 GPALPP1Q8IXQ4 340 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 BCORP1Q8N888 145 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 TMEM178AQ8NBL3 297 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 FAM76AQ8TAV0 307 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 ZNF721Q8TF20 911 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 RIT1Q92963 219 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 C11orf24Q96F05 449 aaPredicted RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 SENP5Q96HI0 755 aaPredicted RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 LRFN1Q9P244 771 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 PSME2Q9UL46 239 aa12.46□□□□□ -0.41
CCDC130-202ENST00000540216 YARS2Q9Y2Z4 477 aaKnown RBP12.46□□□□□ -0.41
CCDC130-202ENST00000540216 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.42
CCDC130-202ENST00000540216 NPIPB8E9PQR5 432 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 AZIN1O14977 448 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 PGRMC2O15173 223 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 ITGA10O75578 1167 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 CRYABP02511 175 aaKnown RBP12.45□□□□□ -0.42
CCDC130-202ENST00000540216 IGKV3-11P04433 115 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 BPGMP07738 259 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 FGF4P08620 206 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 NEFHP12036 1026 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 DRD2P14416 443 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 CREB1P16220 341 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 PRPH2P23942 346 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 ETV4P43268 484 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 HLCSP50747 726 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 SSR4P51571 173 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 RNF4P78317 190 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 C6orf163Q5TEZ5 329 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 KANK2Q63ZY3 851 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 EXOC3L1Q86VI1 746 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 TMEM156Q8N614 296 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 DNAJB8Q8NHS0 232 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 NUBPLQ8TB37 319 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 GRHL3Q8TE85 626 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 FAR1Q8WVX9 515 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 PPWD1Q96BP3 646 aaKnown RBP12.45□□□□□ -0.42
CCDC130-202ENST00000540216 C19orf60Q96EN9 201 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 SCMH1Q96GD3 660 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 APIPQ96GX9 242 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 SIGLEC12Q96PQ1 595 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 MECRQ9BV79 373 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 CENPHQ9H3R5 247 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 NTNG1Q9Y2I2 539 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 WBP11Q9Y2W2 641 aaKnown RBP12.45□□□□□ -0.42
CCDC130-202ENST00000540216 TENM4Q6N022 2769 aa12.45□□□□□ -0.42
CCDC130-202ENST00000540216 OR6C76A6NM76 312 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 TCP11X1B4DZS4 312 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 SLC28A1O00337 649 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 SLC25A12O75746 678 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 NEURL1O76050 574 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 ZWINTO95229 277 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 RASAL1O95294 804 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 ATP1B1P05026 303 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 CPMP14384 443 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 CSNK2A2P19784 350 aaPredicted RBP12.44□□□□□ -0.42
CCDC130-202ENST00000540216 XKP51811 444 aa12.44□□□□□ -0.42
CCDC130-202ENST00000540216 RAE1P78406 368 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms