RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 OR2L2Q8NH16 312 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 FBXO25Q8TCJ0 367 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 PRAM1Q96QH2 718 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 ATOH8Q96SQ7 321 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 RUFY1Q96T51 708 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 DPEP3Q9H4B8 488 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 ELL3Q9HB65 397 aaPredicted RBP5.41□□□□□ -1.54
TRAV11-201ENST00000539512 NDUFA13Q9P0J0 144 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 COPS7AQ9UBW8 275 aa5.41□□□□□ -1.54
TRAV11-201ENST00000539512 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 TLR4O00206 839 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 TXNDC12O95881 172 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 IGHV3-13P01766 116 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 HNRNPFP52597 415 aaKnown RBP5.4□□□□□ -1.54
TRAV11-201ENST00000539512 SSTP61278 116 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 EMC2Q15006 297 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 AGAP7PQ5VUJ5 663 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 CDC42EP5Q6NZY7 148 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 WDR49Q8IV35 697 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 BEST4Q8NFU0 473 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 NABP1Q96AH0 204 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 SLCO4A1Q96BD0 722 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 RAB39BQ96DA2 213 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 DTD2Q96FN9 168 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 CDHR1Q96JP9 859 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 TRIM6Q9C030 488 aaPredicted RBP5.4□□□□□ -1.54
TRAV11-201ENST00000539512 LIME1Q9H400 295 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 KLK13Q9UKR3 277 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 DIMT1Q9UNQ2 313 aaKnown RBP5.4□□□□□ -1.54
TRAV11-201ENST00000539512 STRAPQ9Y3F4 350 aaKnown RBP5.4□□□□□ -1.54
TRAV11-201ENST00000539512 CPQQ9Y646 472 aa5.4□□□□□ -1.54
TRAV11-201ENST00000539512 A0A1B0GTH9 108 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 MACROD2A1Z1Q3 448 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 MT-ND3P03897 115 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 HIST1H2AGP0C0S8 130 aaPredicted RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 OR9G9P0C7N8 305 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 CCDC192P0DO97 292 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 LMO2P25791 158 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 PPP2R1BP30154 601 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 PITPNBP48739 271 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 CNN1P51911 297 aaKnown RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 LIMK2P53671 638 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 CASP9P55211 416 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SRP54P61011 504 aaKnown RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 RIGQ13278 110 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SIX1Q15475 284 aaPredicted RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SNAI3Q3KNW1 292 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 PRAMEF7Q5VXH5 474 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 CWC27Q6UX04 472 aaKnown RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 MIER3Q7Z3K6 550 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 NUFIP2Q7Z417 695 aaKnown RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SLC25A42Q86VD7 318 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 Q8N377 158 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 ZNF781Q8N8C0 355 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 OR1K1Q8NGR3 316 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 EXOC6Q8TAG9 804 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 RDH11Q8TC12 318 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 URGCPQ8TCY9 931 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 HIST1H2ACQ93077 130 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 RBM18Q96H35 190 aaKnown RBP5.39□□□□□ -1.55
TRAV11-201ENST00000539512 DCTN5Q9BTE1 182 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 NACA2Q9H009 215 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 NT5DC2Q9H857 520 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 HOMER3Q9NSC5 361 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 IL19Q9UHD0 177 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SLC9A8Q9Y2E8 581 aa5.39□□□□□ -1.55
TRAV11-201ENST00000539512 SH3PXD2BA1X283 911 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 CFLARO15519 480 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 APRTP07741 180 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 ACADSP16219 412 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 EXOSC7Q15024 291 aaKnown RBP5.38□□□□□ -1.55
TRAV11-201ENST00000539512 POM121L1PQ3SYA9 428 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 TEX35Q5T0J7 233 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 LIPJQ5W064 366 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 ZNF343Q6P1L6 599 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 EMBQ6PCB8 327 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 C4orf32Q8N8J7 132 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 TOMM40LQ969M1 308 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
TRAV11-201ENST00000539512 COG3Q96JB2 828 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 GPR137Q96N19 417 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 SOSTQ9BQB4 213 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 SLC25A19Q9HC21 320 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 KCNMB3Q9NPA1 279 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 FAM153AQ9UHL3 310 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 FBXO7Q9Y3I1 522 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 TEX264Q9Y6I9 313 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 SNED1Q8TER0 1413 aa5.38□□□□□ -1.55
TRAV11-201ENST00000539512 ARHGAP42A6NI28 874 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 K7EQG2 157 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 HSD17B1P14061 328 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 MTIF2P46199 727 aaKnown RBP5.37□□□□□ -1.55
TRAV11-201ENST00000539512 WASHC5Q12768 1159 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 CCDC40Q4G0X9 1142 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 RABEPKQ7Z6M1 372 aa5.37□□□□□ -1.55
TRAV11-201ENST00000539512 SLC47A2Q86VL8 602 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms