RNA–Protein interactions for RNA: ENST00000539362.1

AC130404.1-201, humanhuman

TSL 2 BASIC

Gene AC130404.1, Length 739 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC130404.1-201ENST00000539362 EXT2Q93063 718 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 PGM2Q96G03 612 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 NSMCE2Q96MF7 247 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 GAL3ST4Q96RP7 486 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 ZBTB18Q99592 522 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 CIB1Q99828 191 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 FOXC2Q99958 501 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 GPR61Q9BZJ8 451 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 DCLK3Q9C098 648 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 COQ10BQ9H8M1 238 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 SEPSECSQ9HD40 501 aaKnown RBP4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 TREM1Q9NP99 234 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 GDF3Q9NR23 364 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 SOHLH2Q9NX45 425 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 MRPL39Q9NYK5 338 aaKnown RBP4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 MARCH4Q9P2E8 410 aaPredicted RBP4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 KLHL9Q9P2J3 617 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 ASIC3Q9UHC3 531 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 BZW2Q9Y6E2 419 aaKnown RBP4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 MAP1AP78559 2803 aaPredicted RBP4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 CROCCQ5TZA2 2017 aa4.79□□□□□ -1.64
AC130404.1-201ENST00000539362 COL27A1Q8IZC6 1860 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 A0A075B6Q4 140 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 IGKV6-21A0A0C4DH24 114 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ZSCAN5BA6NJL1 495 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KPNA7A9QM74 516 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 BTBD18B2RXH4 712 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KCNJ18B7U540 433 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 MKRN2OSH3BPM6 223 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 XPO1O14980 1071 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KMOO15229 486 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CLDN3O15551 220 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 DHHO43323 396 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ADAM20O43506 726 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SPRY1O43609 319 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 GATCO43716 136 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RBBP9O75884 186 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 HEXIM1O94992 359 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 DIRAS3O95661 229 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 IFNA2P01563 188 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 APOA1P02647 267 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CLEC3BP05452 202 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 FDPSP14324 419 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 NCF1P14598 390 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 NR1D1P20393 614 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SAT1P21673 171 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 PTAFRP25105 342 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CD82P27701 267 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RGS7P49802 495 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 PDE1BQ01064 536 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SCRN3Q0VDG4 424 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 FADDQ13158 208 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 XRCC4Q13426 336 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 TRA2AQ13595 282 aaKnown RBP eCLIP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 TBCEQ15813 527 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 MEP1BQ16820 701 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 FAM83EQ2M2I3 478 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 C9orf152Q5JTZ5 239 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 EFHC1Q5JVL4 640 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 MPP7Q5T2T1 576 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 NAA35Q5VZE5 725 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SPECC1LQ69YQ0 1117 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 HEPHL1Q6MZM0 1159 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 DENND5BQ6ZUT9 1274 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 TRMT1LQ7Z2T5 733 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 PHLDB2Q86SQ0 1253 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KLBQ86Z14 1044 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ZNF679Q8IYX0 411 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ADGRF3Q8IZF5 1079 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SYCP3Q8IZU3 236 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 PELI3Q8N2H9 469 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RASGEF1CQ8N431 466 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CSGALNACT2Q8N6G5 542 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ZNF680Q8NEM1 530 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 FAM71BQ8TC56 605 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 STT3BQ8TCJ2 826 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 UBLCP1Q8WVY7 318 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 TMEM158Q8WZ71 300 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 IRGQQ8WZA9 623 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 CIDECQ96AQ7 238 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RNF125Q96EQ8 232 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 HEMGNQ9BXL5 484 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 PARD6BQ9BYG5 372 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 FRMD8P1Q9BZ68 369 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 POLR1EQ9GZS1 481 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 C6orf62Q9GZU0 229 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 HDHD2Q9H0R4 259 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 SLC26A1Q9H2B4 701 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RHBGQ9H310 441 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 LIN7CQ9NUP9 197 aaKnown RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 ARHGEF38Q9NXL2 777 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 KLHL28Q9NXS3 571 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 NDUFAF4Q9P032 175 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 LEF1Q9UJU2 399 aaPredicted RBP4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 RAB21Q9UL25 225 aa4.78□□□□□ -1.64
AC130404.1-201ENST00000539362 TMCO1Q9UM00 188 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms