RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 GUCY1B2O75343 617 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 OR6B1O95007 311 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 KRT6AP02538 564 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 KRT6BP04259 564 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SLC35E2P0CK97 266 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 HSD17B3P37058 310 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SOX3P41225 446 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 KRT6CP48668 564 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 MEOX1P50221 254 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 PRKAA2P54646 552 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 CDH13P55290 713 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 NAA20P61599 178 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 CLCQ05315 142 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SRSF11Q05519 484 aaKnown RBP10.72□□□□□ -0.69
RTN3-209ENST00000538995 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 OPN5Q6U736 354 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 RPTNQ6XPR3 784 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 RTL4Q6ZR62 310 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 COMMD6Q7Z4G1 85 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 TDRPQ86YL5 185 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SULF2Q8IWU5 870 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 OR4N5Q8IXE1 308 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 GSPT2Q8IYD1 628 aaKnown RBP10.72□□□□□ -0.69
RTN3-209ENST00000538995 DND1Q8IYX4 353 aaKnown RBP10.72□□□□□ -0.69
RTN3-209ENST00000538995 METTL4Q8N3J2 472 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SLC15A4Q8N697 577 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 ZNF321PQ8N8H1 164 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 LRRN4CLQ8ND94 238 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 C16orf52Q8NHV5 167 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 TRPC4APQ8TEL6 797 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SELENOMQ8WWX9 145 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 CCDC126Q96EE4 140 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 L3HYPDHQ96EM0 354 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 TMEM237Q96Q45 408 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
RTN3-209ENST00000538995 DCDC2Q9UHG0 476 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 NPIPA1Q9UND3 350 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 SLC12A4Q9UP95 1085 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 ZGRF1Q86YA3 2104 aa10.72□□□□□ -0.69
RTN3-209ENST00000538995 A0A1B0GTL3 188 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 CCDC151A5D8V7 595 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 WWP2O00308 870 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 TFECO14948 347 aaPredicted RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 ZG16O60844 167 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 GLRA3O75311 464 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 PRKRAO75569 313 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 SUPT7LO94864 414 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 ENO1P06733 434 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 KLK1P06870 262 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 PYGBP11216 843 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 IMPDH1P20839 514 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 MAPK12P53778 367 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 PKNOX1P55347 436 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 CENPEQ02224 2701 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 TBL3Q12788 808 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 CSTF3Q12996 717 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 LCP2Q13094 533 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 UNC50Q53HI1 259 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 PIGGQ5H8A4 983 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 RNFT1Q5M7Z0 435 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 CCNYL2Q5T2Q4 361 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 NDUFAF5Q5TEU4 345 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 RGS9BPQ6ZS82 235 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 GPRIN3Q6ZVF9 776 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 RPS27LQ71UM5 84 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 MDGA2Q7Z553 956 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 SPPL2CQ8IUH8 684 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 SLC22A8Q8TCC7 542 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 RIT1Q92963 219 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 MTFMTQ96DP5 389 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 DIDO1Q9BTC0 2240 aaKnown RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 TSPAN10Q9H1Z9 355 aaPredicted RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 TEX10Q9NXF1 929 aaPredicted RBP10.71□□□□□ -0.69
RTN3-209ENST00000538995 ZNF225Q9UK10 706 aa10.71□□□□□ -0.69
RTN3-209ENST00000538995 C1orf226A1L170 272 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GLOD5A6NK44 160 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 H3BQF6 201 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 ACOT7O00154 380 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 MANBAO00462 879 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 CCL21O00585 134 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 PPP6CO00743 305 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 OR4F21O95013 312 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 PDYNP01213 254 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GBAP04062 536 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 TSPAN8P19075 237 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 PIK3R1P27986 724 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 SLC37A1P57057 533 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 TRA2BP62995 288 aaKnown RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 ERVK-8P63133 956 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GALNT1Q10472 559 aaPredicted RBP10.7□□□□□ -0.7
RTN3-209ENST00000538995 SGO1Q5FBB7 561 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 IL20RBQ6UXL0 311 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 RNF111Q6ZNA4 994 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 DGAT2L6Q6ZPD8 337 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 GK5Q6ZS86 529 aa10.7□□□□□ -0.7
RTN3-209ENST00000538995 SLC29A4Q7RTT9 530 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms