RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CD300AQ9UGN4 299 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FBXL3Q9UKT7 428 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SCML2Q9UQR0 700 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3DA0A087WVF3 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3IA0A087WXS9 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3EA0A087X179 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3KA0A087X1G2 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3FA6NER0 549 aaPredicted RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 A8MXE2 369 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 NUDT19A8MXV4 375 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3LB9A6J9 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 OIP5O43482 229 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SLC16A8O95907 504 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3HP0C7X1 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 BLKP51451 505 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FXYD6P3P58550 94 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 OGDHQ02218 1023 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 INCA1Q0VD86 236 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FGFBP1Q14512 234 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 UNC50Q53HI1 259 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 MS4A13Q5J8X5 152 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 HES5Q5TA89 166 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3GQ6DHY5 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3CQ6IPX1 549 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CLEC20AQ6ZU45 233 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 LACC1Q8IV20 430 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TBC1D3Q8IZP1 549 aaPredicted RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 FBXO22Q8NEZ5 403 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 GAB3Q8WWW8 586 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 NDRG1Q92597 394 aaKnown RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 NINJ1Q92982 152 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SNX18Q96RF0 628 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SLC38A1Q9H2H9 487 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ADAM7Q9H2U9 754 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 NIPAL2Q9H841 368 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 GORASP2Q9H8Y8 452 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 AGPAT4Q9NRZ5 378 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CENPMQ9NSP4 180 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ASB6Q9NWX5 421 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ATG4BQ9Y4P1 393 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ATRNL1Q5VV63 1379 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FAM230AA0A1W2PPH8 454 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CCL22O00626 93 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 STBD1O95210 358 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CKMT1AP12532 417 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 BMP1P13497 986 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CASP3P42574 277 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 NDUFV1P49821 464 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CASP9P55211 416 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FAPQ12884 760 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 POM121L1PQ3SYA9 428 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 RNASE10Q5GAN6 216 aaKnown RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 UNC5DQ6UXZ4 953 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CEP68Q76N32 757 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SPARTQ8N0X7 666 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 OR9A1PQ8NGU1 263 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SLC35F5Q8WV83 523 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ZNF516Q92618 1163 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ELMOD3Q96FG2 381 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 CD84Q9UIB8 345 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FAM208AQ9UK61 1670 aaKnown RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 TRBV2A0A0J9YWF9 115 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 P2RX6O15547 441 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 SGCEO43556 437 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 FCER2P06734 321 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 DRD2P14416 443 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 EDNRBP24530 442 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 GNRHRP30968 328 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TIA1P31483 386 aaKnown RBP eCLIP6.64□□□□□ -1.354e-6■■■□□ 18.5
SORT1-209ENST00000538502 MMP12P39900 470 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 RPS13P62277 151 aaKnown RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 GRM2Q14416 872 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ATXN7L3Q14CW9 347 aaPredicted RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 ZNF691Q5VV52 312 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TPGS2Q68CL5 300 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 NRROSQ86YC3 692 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 OR2T35Q8NGX2 323 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 ZCCHC10Q8TBK6 192 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 DDX1Q92499 740 aaKnown RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 LIN37Q96GY3 246 aaPredicted RBP6.64□□□□□ -1.35
SORT1-209ENST00000538502 RBP7Q96R05 134 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 LRFN1Q9P244 771 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TMPRSS11EQ9UL52 423 aa6.64□□□□□ -1.35
SORT1-209ENST00000538502 TCRBV3S1A0A5B6 114 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 ATP6V1G2-DDX39BF2Z307 99 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 SCAMP2O15127 329 aaKnown RBP6.63□□□□□ -1.35
SORT1-209ENST00000538502 AP1G1O43747 822 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 SSX5O60225 188 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 SOCS5O75159 536 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 AHSA1O95433 338 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 ZNF616Q08AN1 781 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 CHAF1BQ13112 559 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 LRRC32Q14392 662 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 ITPRIPL2Q3MIP1 535 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 ESCO2Q56NI9 601 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 ATAD3CQ5T2N8 411 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 PLAG1Q6DJT9 500 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 TMIGD1Q6UXZ0 262 aa6.63□□□□□ -1.35
SORT1-209ENST00000538502 GPR142Q7Z601 462 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms