RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 KIAA1324LA8MWY0 1029 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 AHRRA9YTQ3 701 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 DYRK3O43781 588 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TRAPPC6AO75865 159 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 IGKV3-11P04433 115 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CD53P19397 219 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CD22P20273 847 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CPN2P22792 545 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 ATP5A1P25705 553 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CDC25BP30305 580 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TIMP3P35625 211 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 STT3AP46977 705 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TAS2R39P59534 338 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 DOC2AQ14183 400 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CYP1B1Q16678 543 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 UBE3DQ7Z6J8 389 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 GRK7Q8WTQ7 553 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 ANKRD7Q92527 254 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 ESAMQ96AP7 390 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TRIB1Q96RU8 372 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TIMP4Q99727 224 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 MDFIQ99750 246 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 TMEM79Q9BSE2 394 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 ROGDIQ9GZN7 287 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 PITHD1Q9GZP4 211 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 DNAJC11Q9NVH1 559 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CNIH4Q9P003 139 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CNOT11Q9UKZ1 510 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 CAMK2AQ9UQM7 478 aa12.85□□□□□ -0.35
SMARCA4-206ENST00000538456 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SAP18O00422 153 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 TAPBPO15533 448 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 LY6G6DO95868 133 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 FBXO45P0C2W1 286 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SERPINB3P29508 390 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 ELK3P41970 407 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SSR2P43308 183 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 HSPA7P48741 367 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 PLIN5Q00G26 463 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 TOMM20Q15388 145 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 TGFBIQ15582 683 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 BICRALQ6AI39 1079 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 TMEM64Q6YI46 380 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SLC29A4Q7RTT9 530 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 ZC3HC1Q86WB0 502 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SPATA6LQ8N4H0 392 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SLC15A4Q8N697 577 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 DIO2Q92813 273 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 PTCD3Q96EY7 689 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 RBM18Q96H35 190 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 FBXL20Q96IG2 436 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 KRT12Q99456 494 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 TBCDQ9BTW9 1192 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 CAPS2Q9BXY5 557 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 WWTR1Q9GZV5 400 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 EHD1Q9H4M9 534 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 SLC6A5Q9Y345 797 aa12.84□□□□□ -0.35
SMARCA4-206ENST00000538456 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.35
SMARCA4-206ENST00000538456 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 TRIM3O75382 744 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PRKRAO75569 313 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ACSL3O95573 720 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 C1QAP02745 245 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 HRGP04196 525 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PCSK6P29122 969 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 HERVK_113P63132 956 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ERVK-8P63133 956 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 IGLV3-21P80748 117 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 SORDQ00796 357 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PDK4Q16654 411 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 AP5B1Q2VPB7 878 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 Q5PR19 223 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 DCST1Q5T197 706 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 NSUN5P2Q63ZY6 315 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PM20D2Q8IYS1 436 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ART5Q96L15 291 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 EFCAB11Q9BUY7 163 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 SORBS1Q9BX66 1292 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ERVK-6Q9BXR3 956 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 MS4A8Q9BY19 250 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PHACTR1Q9C0D0 580 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 ERVK-19Q9WJR5 959 aa12.83□□□□□ -0.36
SMARCA4-206ENST00000538456 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms