RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 NPIPA2E9PIF3 369 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 NPIPA3F8WFD2 350 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 UBXN8O00124 270 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 BCKDKO14874 412 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SH3BGRLO75368 114 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 GLSO94925 669 aaPredicted RBP11.28□□□□□ -0.6
CCND1-202ENST00000535993 SHBGP04278 402 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 P04436 131 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 EPB42P16452 691 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 PIK3CBP42338 1070 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 STT3AP46977 705 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 RAP1GDS1P52306 607 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 PHEXP78562 749 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 ID2Q02363 134 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 TLE4Q04727 773 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SETDB1Q15047 1291 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 MPEG1Q2M385 716 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 TSNAXIP1Q2TAA8 658 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 GXYLT1Q4G148 440 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 OR4C11Q6IEV9 310 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 GRHL2Q6ISB3 625 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 FAM47EQ6ZV65 393 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 TDRPQ86YL5 185 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 ZNF321PQ8N8H1 164 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 OR7G3Q8NG95 312 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 OR5M3Q8NGP4 307 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
CCND1-202ENST00000535993 TANKQ92844 425 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 RGMAQ96B86 450 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
CCND1-202ENST00000535993 REPS1Q96D71 796 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 ART5Q96L15 291 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 VPS11Q9H270 941 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
CCND1-202ENST00000535993 PPCSQ9HAB8 311 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 IL1RL2Q9HB29 575 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 MCCC2Q9HCC0 563 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCND1-202ENST00000535993 ZNF358Q9NW07 568 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 PSMC3IPQ9P2W1 217 aaPredicted RBP11.28□□□□□ -0.6
CCND1-202ENST00000535993 PHF11Q9UIL8 331 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
CCND1-202ENST00000535993 A0A0G2JMM0 328 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 A0A1W2PPB8 328 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 A0A1W2PRS3 328 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 FIGNL2A6NMB9 653 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 KIR3DP1A8MWS1 328 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 G3V3Y1 287 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 SAP18O00422 153 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 FGF17O60258 216 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 ETHE1O95571 254 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 IGHG3P01860 377 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 RBP1P09455 135 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 NUDT17P0C025 328 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 SBK3P0C264 359 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 POU3F2P20265 443 aaPredicted RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 ARFIP1P53367 373 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 ALDH18A1P54886 795 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 PLIN5Q00G26 463 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 PMPCAQ10713 525 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 TBL3Q12788 808 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 DDX39BQ13838 428 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 PIGGQ5H8A4 983 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 METTL2BQ6P1Q9 378 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 KLC3Q6P597 504 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 EMBQ6PCB8 327 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 SH2D5Q6ZV89 423 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 GPR180Q86V85 440 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 LCA5Q86VQ0 697 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 MYLK4Q86YV6 388 aaPredicted RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 OR4N5Q8IXE1 308 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 DND1Q8IYX4 353 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 TEX9Q8N6V9 391 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 HUS1BQ8NHY5 278 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 SLC22A8Q8TCC7 542 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 ZNF721Q8TF20 911 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 SENP5Q96HI0 755 aaPredicted RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 SMC6Q96SB8 1091 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 TREX2Q9BQ50 279 aaPredicted RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 OR51B5Q9H339 312 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 ITGB1BP2Q9UKP3 347 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 TSC22D4Q9Y3Q8 395 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 PCDHGA11Q9Y5H2 935 aa11.27□□□□□ -0.61
CCND1-202ENST00000535993 INTS1Q8N201 2190 aaKnown RBP11.27□□□□□ -0.61
CCND1-202ENST00000535993 IQANK1A0A1B0GTG1 560 aa11.26□□□□□ -0.61
CCND1-202ENST00000535993 A0A1B0GVC2 190 aa11.26□□□□□ -0.61
CCND1-202ENST00000535993 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
CCND1-202ENST00000535993 GFAPP14136 432 aa11.26□□□□□ -0.61
CCND1-202ENST00000535993 PTX3P26022 381 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms