RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ERVFC1P60507 584 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 SELENOWP63302 87 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 TP53BP2Q13625 1128 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 MFSD13AQ14CX5 517 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 CCSMST1Q4G0I0 132 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 IQCCQ4KMZ1 466 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 TMPRSS11BQ86T26 416 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF480Q8WV37 535 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 TPD52L3Q96J77 140 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 FRMD6Q96NE9 622 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 WNT6Q9Y6F9 365 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 V9GYH0 126 aa17.1■□□□□ 0.33
RAB40C-203ENST00000535977 E9PQ18 207 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 KIAA0355O15063 1070 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 KIAA0513O60268 411 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 ACADMP11310 421 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 TALDO1P37837 337 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 CRISP3P54108 245 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 NPRL3Q12980 569 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF267Q14586 743 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-203ENST00000535977 RDH10Q8IZV5 341 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 VWA5B2Q8N398 1253 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 OR9A1PQ8NGU1 263 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 ASB15Q8WXK1 588 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 SLC22A4Q9H015 551 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 NIPAL2Q9H841 368 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 RGS5O15539 181 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 IFNA14P01570 189 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 C1QBP02746 253 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 CISD3P0C7P0 127 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 NPPBP16860 134 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 PDHA2P29803 388 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 TBCEQ15813 527 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF79Q15937 498 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 PARS2Q7L3T8 475 aaKnown RBP17.09■□□□□ 0.33
RAB40C-203ENST00000535977 GALNT11Q8NCW6 608 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 OR52N2Q8NGI0 321 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.09■□□□□ 0.339e-13■■■■■ 40.9
RAB40C-203ENST00000535977 GPR151Q8TDV0 419 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 LINC00615Q96LM1 132 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-203ENST00000535977 GABARAPL3Q9BY60 117 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 SLC27A6Q9Y2P4 619 aa17.09■□□□□ 0.33
RAB40C-203ENST00000535977 ACRP10323 421 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 ITGB8P26012 769 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 TBPL1P62380 186 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 DHCR24Q15392 516 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.33
RAB40C-203ENST00000535977 PLEKHM3Q6ZWE6 761 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 LILRA3Q8N6C8 439 aaPredicted RBP17.08■□□□□ 0.33
RAB40C-203ENST00000535977 TMIEQ8NEW7 156 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF675Q8TD23 568 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 MYLIPQ8WY64 445 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 DPEP2Q9H4A9 486 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 RNF121Q9H920 327 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 SMURF1Q9HCE7 757 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 AMBNQ9NP70 447 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 MYNNQ9NPC7 610 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 KLHL21Q9UJP4 597 aa17.08■□□□□ 0.33
RAB40C-203ENST00000535977 A8MVJ9 347 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 TSC22D2O75157 780 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 PBLDP30039 288 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-203ENST00000535977 SLC19A1P41440 591 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 B2MP61769 119 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 HOXC5Q00444 222 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 GRIN2CQ14957 1233 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 PLPP4Q5VZY2 271 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 UNC5DQ6UXZ4 953 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 OTOP2Q7RTS6 562 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 CFAP206Q8IYR0 622 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 NAGSQ8N159 534 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 GPR156Q8NFN8 814 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 MSANTD3Q96H12 275 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 HRASLS5Q96KN8 279 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 TMEM38AQ9H6F2 299 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 DMRT3Q9NQL9 472 aa17.08■□□□□ 0.32
RAB40C-203ENST00000535977 HIDE1A8MVS5 230 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 RB1P06400 928 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 PXNP49023 591 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 RPP38P78345 283 aaKnown RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 PDE7AQ13946 482 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 SLBPQ14493 270 aaKnown RBP eCLIP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 GCNT6Q5T4J0 391 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 TRIM40Q6P9F5 258 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 SLC30A8Q8IWU4 369 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 UBE2J2Q8N2K1 259 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 OXR1Q8N573 874 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 OR8H1Q8NGG4 311 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 TRIM43Q96BQ3 446 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 C11orf54Q9H0W9 315 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 IL23AQ9NPF7 189 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 DYRK4Q9NR20 520 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 EVA1BQ9NVM1 165 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 GPR34Q9UPC5 381 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 LINC00862A6NCI5 91 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 KPNA3O00505 521 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-203ENST00000535977 PI15O43692 258 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 GPR37L1O60883 481 aa17.07■□□□□ 0.32
RAB40C-203ENST00000535977 DIRAS1O95057 198 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms