RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SLC22A11Q9NSA0 550 aa8.62□□□□□ -1.03
SF3B2-216ENST00000534765 TNFRSF10DQ9UBN6 386 aa8.62□□□□□ -1.03
SF3B2-216ENST00000534765 CKAP5Q14008 2032 aa8.62□□□□□ -1.03
SF3B2-216ENST00000534765 LY86O95711 162 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PKMP14618 531 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 MAP2K3P46734 347 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZFP36L2P47974 494 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 FNTBP49356 437 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZBTB37Q5TC79 503 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 KIAA1211LQ6NV74 962 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TMEM88Q6PEY1 159 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 HAGHLQ6PII5 290 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 FAM45AQ8TCE6 357 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ADAMTS14Q8WXS8 1223 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PDCD10Q9BUL8 212 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 NTMT1Q9BV86 223 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 MND1Q9BWT6 205 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 AMBRA1Q9C0C7 1298 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TM9SF3Q9HD45 589 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 KRT84Q9NSB2 600 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 NPAP1Q9NZP6 1156 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 DUSP12Q9UNI6 340 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PCDHGB1Q9Y5G3 927 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CFAP47Q6ZTR5 3102 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 OR5K3A6NET4 321 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CDRT1O95170 752 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 VIPP01282 170 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 HNRNPA1P09651 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SLC2A2P11168 524 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 DGKGP49619 791 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 HTR6P50406 440 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PGDP52209 483 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CTSCP53634 463 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GPR50Q13585 617 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 EXOSC2Q13868 293 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TMEM31Q5JXX7 168 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ADNP2Q6IQ32 1131 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 MRNIPQ6NTE8 343 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LRFN4Q6PJG9 635 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ENPP6Q6UWR7 440 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GDPD4Q6W3E5 623 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PLA2G15Q8NCC3 412 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 TTC9Q92623 222 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PIGKQ92643 395 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 C19orf60Q96EN9 201 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 AURKBQ96GD4 344 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LYSMD1Q96S90 227 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ASPNQ9BXN1 380 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 NSUN3Q9H649 340 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ACOT13Q9NPJ3 140 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PDP1Q9P0J1 537 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF490Q9ULM2 529 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CLEC4AQ9UMR7 237 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ARID1BQ8NFD5 2236 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LOC105369274A0A096LPK9 316 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 M0R129 80 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 NDUFS3O75489 264 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SLC25A14O95258 325 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GUCA1CO95843 209 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 RB1P06400 928 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SLC6A2P23975 617 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 DDX6P26196 483 aaKnown RBP eCLIP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CSNK1DP48730 415 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF234Q14588 700 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GRK1Q15835 563 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 RFX4Q33E94 735 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SGO1Q5FBB7 561 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZC3H12BQ5HYM0 836 aaKnown RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GPRC6AQ5T6X5 926 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 BCL2L15Q5TBC7 163 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 KANSL1Q7Z3B3 1105 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 OR4N4Q8N0Y3 316 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GPR156Q8NFN8 814 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 COQ10AQ96MF6 247 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF300Q96RE9 604 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 AKTIPQ9H8T0 292 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CCNB1IP1Q9NPC3 277 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LATS2Q9NRM7 1088 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SLAMF8Q9P0V8 285 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ACSL5Q9ULC5 683 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 PLXND1Q9Y4D7 1925 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 OR7A17O14581 309 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 IGSF6O95976 241 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 RAP2AP10114 183 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ATP5F1P24539 256 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 DNASE1P24855 282 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 CSTF2P33240 577 aaKnown RBP eCLIP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 SPINT3P49223 89 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 GBX2P52951 348 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 DIO3P55073 304 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF169Q14929 603 aaPredicted RBP8.61□□□□□ -1.03
SF3B2-216ENST00000534765 MFSD13AQ14CX5 517 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 RBBP7Q16576 425 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ANGPTL8Q6UXH0 198 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 MAMSTRQ6ZN01 415 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 B3GNT8Q7Z7M8 397 aa8.61□□□□□ -1.03
SF3B2-216ENST00000534765 ZNF605Q86T29 641 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms